Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2120 ATGGAAGATACTCACAAGATCATTCCTAGTTTGAAAGGCCACTTGAATGCCTTTTTTGGCGTTTATGATGGCCATGGAGGCAGGAAGGCAGCGAAATTTGTTGCAGAAAATTTGCACAATAACATATTTGAAGTGGTGGGCAATTGCACGGGATCTGCAGAAAAGGAGGAAGCAATTAAAGCTGCTTTCTTGAAAACGGACCGAGACTTCTTGAATCTGGGTTTAGGCAGTGGTGCCTGCTGTGTCACAGCTCTGATACAAGGAGAAGAACTTGTTGTTTCCAATTTGGGAGACTGTAGGGCTGTTCTTTCCAGAGGCGGAGTAGCTGAAGCAGTAACAAGGGACCATAGAGTTGAACAGGAGGATGAACGGAAAAGAATAGAAAACAAGGGTGGATATGTTGAGATTCATAGGGGGGCATGGAGAGTTCATGGAGTTCTTTCTGTTTCTAGAAGCATTGGAGATGCTCATTTGAAGGACTGGGTGCTGGCAGAGCCTGATTCAAAGGTCCTACTTCTTAGTGAAGACATGGAATTTCTTGTTCTAGCCACTGATGGGCTATGGGAAAAGGTTGGAACCCAAGAGACTGTTGATGTGGTGACACGATTGAGGTTGATGGGTAAAAGTTTTGGGCTACCAAAAGGTTCCTTGAGAAGCATTAGCTATGCCCATTGCTCTGTGAATCCAAGTCCATCAAAACTACGGAGAGTTTCATTAGTCACGCAACCGAAAGTCGGGGTGGGCCAATCTCCAATCTGTGAGAAGGCAAGTGGTAGCTGTGAAGAAGGTGAATATGACTATTCTTGTGAAATTGAAAGTCCTGGATCAAAATCAAGGAGAATATCATTGGTCAGACATAGAAAGATGAAGACAGAATCTTCACCTAAGGAGAATAATGATTGCTATGTGAAGAGACCCACTTCCAGTGGACTTGTGGCTGCTTGTAAGGAACTTGTAGATCTAGCTCTGCGTAGGGGTAGTCTGGATGACATTACCGTAATGATAATCGACTTAAGCCACTTTAGGTACAAGAATCAATCTGAGAGTTCTTGCAACTTGTAA 1062 43.79 MEDTHKIIPSLKGHLNAFFGVYDGHGGRKAAKFVAENLHNNIFEVVGNCTGSAEKEEAIKAAFLKTDRDFLNLGLGSGACCVTALIQGEELVVSNLGDCRAVLSRGGVAEAVTRDHRVEQEDERKRIENKGGYVEIHRGAWRVHGVLSVSRSIGDAHLKDWVLAEPDSKVLLLSEDMEFLVLATDGLWEKVGTQETVDVVTRLRLMGKSFGLPKGSLRSISYAHCSVNPSPSKLRRVSLVTQPKVGVGQSPICEKASGSCEEGEYDYSCEIESPGSKSRRISLVRHRKMKTESSPKENNDCYVKRPTSSGLVAACKELVDLALRRGSLDDITVMIIDLSHFRYKNQSESSCNL 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 90674721 90677825 + Tan0020312.2 Tan02g2120 744746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2120 353 Gene3D - 1 346 IPR036457 -
Tan02g2120 353 ProSitePatterns PPM-type phosphatase domain signature. 18 26 IPR000222 GO:0043169(InterPro)
Tan02g2120 353 Pfam Protein phosphatase 2C 1 204 IPR001932 -
Tan02g2120 353 SMART PP2C_4 1 336 IPR001932 -
Tan02g2120 353 PANTHER PROTEIN PHOSPHATASE 1 337 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan02g2120 353 SUPERFAMILY PP2C-like 1 339 IPR036457 -
Tan02g2120 353 ProSiteProfiles PPM-type phosphatase domain profile. 1 338 IPR001932 -
Tan02g2120 353 CDD PP2Cc 1 202 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2120 Tan-Chr2:90674721 Tan04g1322 Tan-Chr4:13953942 1.30E-60 dispersed
Tan02g2119 Tan-Chr2:90674721 Tan02g2120 Tan-Chr2:90674721 2.40E-202 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2120 - - - 0.0