Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g2122 | ATGTCTAAACCCTGGGGTGGAATCGGAGCCTGGGCCGCTGATGCCGAGCGTGCCGAGGCTGAGGAACGAGAGGCTCAAGCTGCGGCCGCAGCCTCCCAAGCAGAATCCAAGAATTTCCCTAGCCTTAAGGAAGCTGTCAACACCAAGCCCAAGAAGAAGAAGATGTCGCTCTCGGAATTCACTATGGGCACCTTGACGGGTCCGGGCGCCGGCAGTAGGCAAACGGACAGCCAGGGCTTGACGCCGGAGGAGATGCTTCGGCTTCCGACTGGTCCAAAAGACCGTTCTGGTGAGGAAATGCGTCCTGGCCGGCTCGGTGGGGGATTTCCCACTTATGATCGGCACGGTATGTCTGCTGGTCGATTTCGAGACCGTGATGAAGGCGATGGGTCTTGGGGTGGTGGTCGACGATCGTATGGTGGGTTCGATGAGGAACGTAGGGGTCCATCTCCTAGGGCTTCTAGTTTCGATCAACCTTCGAGGGCTGACGAGGTGGATAATTGGGCAATGACGAAGAAATCTCCCACATTGGATTCAGGGCGACAAAATAGGTATGGGTCGCTAGGCGGTGGCATGGGTGGGATTGCATCTAGGGCAGACGAGGTCGATAACTGGGCAAGTGTGAAAAAGCCTATTCCATCGAGATCTTCCACATTTGGTTCTGGTTACCGTGACCGTGAGGCGAATGAGCCTGATCGCTGGACTAGAGGCCGTTCACGTGATAGTGACACAGAACGACCCCGATTAGTATTGGATCCGCCCAAAGTTAATGTTGTTACAAATGAAGCAACAAGGACGAGCAAGCCAAGTCCTTTTGGAGCAGCAAGGCCAAGAGAGGAGGTTTTGGCTGAGAAGGGGTTGGATTGGAAGAAGCTGGATACCGAAATTGAGGCCAAAAGAACCAGTAGGCCAACCAGTTCTCACTCTAGCAGACCTTCTAGTGCTCAATCCAGCCGTTCGGAGGGTCCAGGATTACAGGGCGTTGAAAATGTGATGAAGCCGAGGCCAAAAGTTAATCCATTTGGAGATGCCAAACCTAGGGAAGTTTTGCTGGAGGAACGTGGCAAGGACTGGCGAAAGATAGATCTGCAACTTGAGCATCGTGCTGTTGACAGGCCTGAAACAGAAGAGGAAAAGATGTTGAAAGAGGAAATTGATGTTCTAAGAAAGGAACTTGAGGAAGGCTTATCTCTAAATTCTAACAAAGAATCGGTGCAAGAATCTGCTGGAGAGATACAAAATCTGCGTGACAGAATAAATAAAAAGGAACGTGAACTGGAGACGCTGGTCCTTGATTTGGATGATAAAGTTCGCTTTGGGAAGAAAGCCACTGAGAGACCTGGCTCTGGAGCAGGTAGGGCTGCTGTCTTTCCAGAAAGACCACCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTTGAGTCTATGGACCGGCCTCGATCACGCGGCACTGCAGATGTATGGAGTAGACCTACTGATGATAGAAAACCAATCCAAGGTGCCAGAGATAGAGGATTTTTGGGCAACAGAGACATGGAGAGGTCGAGGGATAGGTGGTAA | 1560 | 51.28 | MSKPWGGIGAWAADAERAEAEEREAQAAAAASQAESKNFPSLKEAVNTKPKKKKMSLSEFTMGTLTGPGAGSRQTDSQGLTPEEMLRLPTGPKDRSGEEMRPGRLGGGFPTYDRHGMSAGRFRDRDEGDGSWGGGRRSYGGFDEERRGPSPRASSFDQPSRADEVDNWAMTKKSPTLDSGRQNRYGSLGGGMGGIASRADEVDNWASVKKPIPSRSSTFGSGYRDREANEPDRWTRGRSRDSDTERPRLVLDPPKVNVVTNEATRTSKPSPFGAARPREEVLAEKGLDWKKLDTEIEAKRTSRPTSSHSSRPSSAQSSRSEGPGLQGVENVMKPRPKVNPFGDAKPREVLLEERGKDWRKIDLQLEHRAVDRPETEEEKMLKEEIDVLRKELEEGLSLNSNKESVQESAGEIQNLRDRINKKERELETLVLDLDDKVRFGKKATERPGSGAGRAAVFPERPPSQGSFDESRSFESMDRPRSRGTADVWSRPTDDRKPIQGARDRGFLGNRDMERSRDRW | 519 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 90682678 | 90687951 | - | Tan0013224.1 | Tan02g2122 | 744748 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g2122 | 519 | MobiDBLite | consensus disorder prediction | 305 | 324 | - | - | |
Tan02g2122 | 519 | MobiDBLite | consensus disorder prediction | 278 | 304 | - | - | |
Tan02g2122 | 519 | Pfam | Plant specific eukaryotic initiation factor 4B | 1 | 505 | IPR010433 | GO:0003743(InterPro) | |
Tan02g2122 | 519 | Coils | Coil | 15 | 37 | - | - | |
Tan02g2122 | 519 | Coils | Coil | 405 | 432 | - | - | |
Tan02g2122 | 519 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B | 1 | 442 | IPR010433 | GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER) | |
Tan02g2122 | 519 | MobiDBLite | consensus disorder prediction | 440 | 519 | - | - | |
Tan02g2122 | 519 | MobiDBLite | consensus disorder prediction | 1 | 348 | - | - | |
Tan02g2122 | 519 | MobiDBLite | consensus disorder prediction | 117 | 132 | - | - | |
Tan02g2122 | 519 | MobiDBLite | consensus disorder prediction | 59 | 81 | - | - | |
Tan02g2122 | 519 | MobiDBLite | consensus disorder prediction | 225 | 250 | - | - | |
Tan02g2122 | 519 | MobiDBLite | consensus disorder prediction | 471 | 519 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g2122 | Tan-Chr2:90682678 | Tan05g1181 | Tan-Chr5:11495604 | 3.20E-31 | dispersed | |
Tan02g2122 | Tan-Chr2:90682678 | Tan02g0706 | Tan-Chr2:6598725 | 8.10E-35 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g2122 | K03258 | - | csv:101206526 | 880.937 |