Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2122 ATGTCTAAACCCTGGGGTGGAATCGGAGCCTGGGCCGCTGATGCCGAGCGTGCCGAGGCTGAGGAACGAGAGGCTCAAGCTGCGGCCGCAGCCTCCCAAGCAGAATCCAAGAATTTCCCTAGCCTTAAGGAAGCTGTCAACACCAAGCCCAAGAAGAAGAAGATGTCGCTCTCGGAATTCACTATGGGCACCTTGACGGGTCCGGGCGCCGGCAGTAGGCAAACGGACAGCCAGGGCTTGACGCCGGAGGAGATGCTTCGGCTTCCGACTGGTCCAAAAGACCGTTCTGGTGAGGAAATGCGTCCTGGCCGGCTCGGTGGGGGATTTCCCACTTATGATCGGCACGGTATGTCTGCTGGTCGATTTCGAGACCGTGATGAAGGCGATGGGTCTTGGGGTGGTGGTCGACGATCGTATGGTGGGTTCGATGAGGAACGTAGGGGTCCATCTCCTAGGGCTTCTAGTTTCGATCAACCTTCGAGGGCTGACGAGGTGGATAATTGGGCAATGACGAAGAAATCTCCCACATTGGATTCAGGGCGACAAAATAGGTATGGGTCGCTAGGCGGTGGCATGGGTGGGATTGCATCTAGGGCAGACGAGGTCGATAACTGGGCAAGTGTGAAAAAGCCTATTCCATCGAGATCTTCCACATTTGGTTCTGGTTACCGTGACCGTGAGGCGAATGAGCCTGATCGCTGGACTAGAGGCCGTTCACGTGATAGTGACACAGAACGACCCCGATTAGTATTGGATCCGCCCAAAGTTAATGTTGTTACAAATGAAGCAACAAGGACGAGCAAGCCAAGTCCTTTTGGAGCAGCAAGGCCAAGAGAGGAGGTTTTGGCTGAGAAGGGGTTGGATTGGAAGAAGCTGGATACCGAAATTGAGGCCAAAAGAACCAGTAGGCCAACCAGTTCTCACTCTAGCAGACCTTCTAGTGCTCAATCCAGCCGTTCGGAGGGTCCAGGATTACAGGGCGTTGAAAATGTGATGAAGCCGAGGCCAAAAGTTAATCCATTTGGAGATGCCAAACCTAGGGAAGTTTTGCTGGAGGAACGTGGCAAGGACTGGCGAAAGATAGATCTGCAACTTGAGCATCGTGCTGTTGACAGGCCTGAAACAGAAGAGGAAAAGATGTTGAAAGAGGAAATTGATGTTCTAAGAAAGGAACTTGAGGAAGGCTTATCTCTAAATTCTAACAAAGAATCGGTGCAAGAATCTGCTGGAGAGATACAAAATCTGCGTGACAGAATAAATAAAAAGGAACGTGAACTGGAGACGCTGGTCCTTGATTTGGATGATAAAGTTCGCTTTGGGAAGAAAGCCACTGAGAGACCTGGCTCTGGAGCAGGTAGGGCTGCTGTCTTTCCAGAAAGACCACCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTTGAGTCTATGGACCGGCCTCGATCACGCGGCACTGCAGATGTATGGAGTAGACCTACTGATGATAGAAAACCAATCCAAGGTGCCAGAGATAGAGGATTTTTGGGCAACAGAGACATGGAGAGGTCGAGGGATAGGTGGTAA 1560 51.28 MSKPWGGIGAWAADAERAEAEEREAQAAAAASQAESKNFPSLKEAVNTKPKKKKMSLSEFTMGTLTGPGAGSRQTDSQGLTPEEMLRLPTGPKDRSGEEMRPGRLGGGFPTYDRHGMSAGRFRDRDEGDGSWGGGRRSYGGFDEERRGPSPRASSFDQPSRADEVDNWAMTKKSPTLDSGRQNRYGSLGGGMGGIASRADEVDNWASVKKPIPSRSSTFGSGYRDREANEPDRWTRGRSRDSDTERPRLVLDPPKVNVVTNEATRTSKPSPFGAARPREEVLAEKGLDWKKLDTEIEAKRTSRPTSSHSSRPSSAQSSRSEGPGLQGVENVMKPRPKVNPFGDAKPREVLLEERGKDWRKIDLQLEHRAVDRPETEEEKMLKEEIDVLRKELEEGLSLNSNKESVQESAGEIQNLRDRINKKERELETLVLDLDDKVRFGKKATERPGSGAGRAAVFPERPPSQGSFDESRSFESMDRPRSRGTADVWSRPTDDRKPIQGARDRGFLGNRDMERSRDRW 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 90682678 90687951 - Tan0013224.1 Tan02g2122 744748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2122 519 MobiDBLite consensus disorder prediction 305 324 - -
Tan02g2122 519 MobiDBLite consensus disorder prediction 278 304 - -
Tan02g2122 519 Pfam Plant specific eukaryotic initiation factor 4B 1 505 IPR010433 GO:0003743(InterPro)
Tan02g2122 519 Coils Coil 15 37 - -
Tan02g2122 519 Coils Coil 405 432 - -
Tan02g2122 519 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 442 IPR010433 GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)
Tan02g2122 519 MobiDBLite consensus disorder prediction 440 519 - -
Tan02g2122 519 MobiDBLite consensus disorder prediction 1 348 - -
Tan02g2122 519 MobiDBLite consensus disorder prediction 117 132 - -
Tan02g2122 519 MobiDBLite consensus disorder prediction 59 81 - -
Tan02g2122 519 MobiDBLite consensus disorder prediction 225 250 - -
Tan02g2122 519 MobiDBLite consensus disorder prediction 471 519 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2122 Tan-Chr2:90682678 Tan05g1181 Tan-Chr5:11495604 3.20E-31 dispersed
Tan02g2122 Tan-Chr2:90682678 Tan02g0706 Tan-Chr2:6598725 8.10E-35 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2122 K03258 - csv:101206526 880.937