Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2141 ATGGCTTCCTTATCTCCTTACCGCCCAAACTTTGTGTTCTCTTCATTTCCGAACCGTGTTCCGTCCCCAAATCCTCTATTTCATGGAGTCCAATTCCGAGGTTTATCCCACCATAAGCCTTTCCTTCGCGGTTCCCTTCCGGTGGCGAGATTCGGGTTTAAGCCCGAGTTCTTGCCTGACCCGGATAGCGCCGAGGGCTTTGTGAGGGAGTTGTTCGGCAAAGCTGAGAGCGTTCTTTATACGATTGCTGACGCTGCCGTGTCTACTTCGCCGGAGAATGTTACCACGGCTAAGCAGACTGACGATTGGTTTACTGGGATTACCAATTATATGGAAAGCGTCCTTAAAATTCTTAAGGATGGACTTTCTACTCTACATGTTCCTTATGCCTATGGTTTTGCCATTATACTCCTTACGGTTCTTGTTAAGGCTGCCACGTTTCCTTTGACGAAGAAGCAGGTAGAATCTGCAATGGCGATGCGTTCTTTGCAACCGCAAGTAAAGGCCATTCAAAAACGCTATGCTGGGGATCAGGAGAGGATTCAACTTGAGACTGCTCGACTTTACAAATTAGCTGGCATAAACCCACTGGCAGGATGCTTACCCACGTTGGCGACAATTCCTGTATGGATTGGACTATACAGAGCTCTTTCAAATGTGGCCAACGAGGGTCTTCTCACGGAAGGTTTTTTCTGGATACCCTCTCTGGCTGGTCCAACTACGATTGCTTCTCGACAAAATGGGAGTGGTATCTCTTGGCTCTTTCCATTTGTTGATGGTCATCCGCCGCTAGGGTGGCCAGATACCTTTGCGTATCTTGTCTTGCCTGTGTTGCTGGTCGTCTCGCAGTATATCTCTGTTCAAATTATGCAATCATCACAGAACAATGATCCAAGCATGAAGAATTCTCAAGCTATAACGAAGTTCCTACCGTTAATGATTGGATATTTTGCACTTTCAGTTCCTTCTGGTCTAAGTCTTTATTGGCTTACCAATAACATCTTGAGCACAGCTCAGCAAGCATGGCTTCAAAAGTTAGGTGGCGCAAAAACCCCGGACAAACAGTTCATTGATGAAATCATCAAACAAGAACAAACCCGAGTCCAGAACCAAGTGCCTGAGTTAAACTCAGTCTCAAAGAGCACAGTAGCCAGACAAGAAGAGAAGCCAACAGCAGGAGGAATAAAACCTGGTGAAAGATTTAAACAGATAAAGGAGCAAGAAGCTAGGATAAGACAGCAAAGAGAAGAAGAAAAAAGGAAAGCTGAAGAGGCAGCCAAGCTTGAATCTCAGACTATAAATGACAGTGAGAAGAGTGCAACTGTTAGAGTCGTAGTCAATGGCAGTCTTTCTAGACAGGATGTGAAGGAAGATCAAAACTCCACGTCCACCCCTACTATGCATAGAACCAATGTGGACGACGAGGTTGGTGATACAAGTGAGCATCTGTCAAGCGCAACTCAGGACAAGGGAGTAGTCGAGACGTACACCGGTGTGGCCAAGGATGCCAAACTAAATGGAGAAGAACAAAGAGAGTGA 1539 45.94 MASLSPYRPNFVFSSFPNRVPSPNPLFHGVQFRGLSHHKPFLRGSLPVARFGFKPEFLPDPDSAEGFVRELFGKAESVLYTIADAAVSTSPENVTTAKQTDDWFTGITNYMESVLKILKDGLSTLHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQVKAIQKRYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIASRQNGSGISWLFPFVDGHPPLGWPDTFAYLVLPVLLVVSQYISVQIMQSSQNNDPSMKNSQAITKFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQAWLQKLGGAKTPDKQFIDEIIKQEQTRVQNQVPELNSVSKSTVARQEEKPTAGGIKPGERFKQIKEQEARIRQQREEEKRKAEEAAKLESQTINDSEKSATVRVVVNGSLSRQDVKEDQNSTSTPTMHRTNVDDEVGDTSEHLSSATQDKGVVETYTGVAKDAKLNGEEQRE 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 90845221 90849789 - Tan0014873.1 Tan02g2141 744767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2141 512 MobiDBLite consensus disorder prediction 392 431 - -
Tan02g2141 512 Pfam 60Kd inner membrane protein 131 345 IPR028055 -
Tan02g2141 512 PANTHER OXA1 46 408 IPR001708 GO:0009535(PANTHER)|GO:0010027(PANTHER)|GO:0016020(InterPro)|GO:0032977(PANTHER)|GO:0032977(InterPro)|GO:0051205(PANTHER)|GO:0072598(PANTHER)
Tan02g2141 512 CDD 5TM_YidC_Alb3 132 345 IPR047196 -
Tan02g2141 512 MobiDBLite consensus disorder prediction 448 470 - -
Tan02g2141 512 NCBIfam membrane protein insertase YidC 131 345 IPR028055 -
Tan02g2141 512 MobiDBLite consensus disorder prediction 372 386 - -
Tan02g2141 512 Coils Coil 401 432 - -
Tan02g2141 512 MobiDBLite consensus disorder prediction 448 495 - -
Tan02g2141 512 MobiDBLite consensus disorder prediction 372 435 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2469 Tan-Chr1:31844502 Tan02g2141 Tan-Chr2:90845221 1.10E-117 dispersed
Tan02g2141 Tan-Chr2:90845221 Tan02g2142 Tan-Chr2:90845221 2.30E-228 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2141 K03217 - csv:101205346 857.44