Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2165 ATGTACTTGTCTGATAAGCCTCGCCCGATTGATATCTACAAGGAAGAAGGTAGCAGAGATATGATGATCGAGGTGGCCTCTAATGGGGAACATCATATTCAACCTCATCAGCAACAACCGACCCATCAGCAGCACCAAATGATGCTCGGGGATAGCAGTGGTGAGGATCATGAAGTCAAGGCGCCGAAGAAGCGGGCGGAGACTTGGGTTCAGGACGAGACTCGGAGCTTAATTGGCCTAAGAAGGGAGATGGATGGATTGTTTAATACCTCGAAATCCAACAAGCATTTGTGGGAGCAGATATCCACTAAGATGAGGGAAAGGGGATTTGATCGCTCTCCGACTATGTGTACTGATAAATGGAGGAACTTGCTCAAGGAGTTCAAGAAGGCTAAGCATCATGACAGGGGAAGTGGCTCTGCTAAGATGTCGTATTACAAGGAGATTGAAGAAATTTTGAAGGAGAGAAGCAAAAATGCGCAGTACAAGAGCCCCACGCCACCCAAGATTGACTCCTACATACAATTCTCAGACAAAGGAATTGAGGATAATGGTCTATCGTTCGGACCTGTCGAAGCTGGTGGCAGGCCCTCACTCAATCTTGAAAGACAGCTAGATCACGATGGACATCCCCTTGCCATCACAGCAGCTGATGCAGTTGCTGCAACGGGCATTCCGCCTTGGAATTGGAGAGAGGCACCCGGAAATGGTGGGGAGAGTCAGGCATTTGGCGGGAGAGTTATATCAGTCAAGTGGGGAGACTACACAAGAAGAATCGGTATTGATGGCACCTCAGAAGCCATCAAGGAGGCTATCAAGTCTGCATTTAGGTTGAGAACTAAACGTGCATTTTGGTTAGAGGATGAGGACCAGGTTGTCAGAAGTCTGGACAGGGACATGCCTTTAGGAAACTACACTCTTCACCTTGATGAAGGATTGGCTGTTAAAATCTGCCTCTATGATGAATCTGATCACTTACCAGTACATACTGAAGAAAAAATTTTTTACACTGAAGATGATTACCGAGATTTTTTAGTTCGTCGGGCCTGGACATGCCTTCGGGAGTTTGATGGGTATAGAAACATCGATAATATGGATGATCTACGTCCTGGTGCAATATACCGCGGTGTAAGTTGA 1137 46.61 MYLSDKPRPIDIYKEEGSRDMMIEVASNGEHHIQPHQQQPTHQQHQMMLGDSSGEDHEVKAPKKRAETWVQDETRSLIGLRREMDGLFNTSKSNKHLWEQISTKMRERGFDRSPTMCTDKWRNLLKEFKKAKHHDRGSGSAKMSYYKEIEEILKERSKNAQYKSPTPPKIDSYIQFSDKGIEDNGLSFGPVEAGGRPSLNLERQLDHDGHPLAITAADAVAATGIPPWNWREAPGNGGESQAFGGRVISVKWGDYTRRIGIDGTSEAIKEAIKSAFRLRTKRAFWLEDEDQVVRSLDRDMPLGNYTLHLDEGLAVKICLYDESDHLPVHTEEKIFYTEDDYRDFLVRRAWTCLREFDGYRNIDNMDDLRPGAIYRGVS 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 91016807 91020818 + Tan0009013.1 Tan02g2165 744791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2165 378 Gene3D - 69 131 - -
Tan02g2165 378 FunFam trihelix transcription factor GT-1 69 131 - -
Tan02g2165 378 Pfam Myb/SANT-like DNA-binding domain 68 152 IPR044822 -
Tan02g2165 378 SMART sant 65 127 IPR001005 -
Tan02g2165 378 PANTHER FI21293P1 34 369 - -
Tan02g2165 378 ProSiteProfiles Myb-like domain profile. 61 125 IPR001005 -
Tan02g2165 378 CDD GT1 67 132 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2165 Tan-Chr2:91016807 Tan07g0169 Tan-Chr7:4244448 1.00E-07 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26816 PF13837 Myb_DNA-bind_4 7.90E-21 CL0123 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2165 - - - 0.0