Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g2190 | ATGGATATTTCCGAGGTTGAAGAAAATCTATTTGCAGCAAGTGATGCCAAGCTTCATGGAGGAATGTGCAAGACTCTTTCTGCAATATACTGTAAAGTATTAACAATTTTCCCTTCATTGGAAGCTGCACGACCTCGGAGCAGATCTGGTATCCAGGCATTATGTTCCTTGCATGTAGCACTTGAAAAAGCCAAGAATACTCTCCAACATTGTACAGAAAGCAGCAAACTTTACTTGGCTATAACTGGGGACTCTGTTCTGTTGAAATTTGAGAAGGTAAAAAGTGCTCTACAAGATAGTCTTAAACGTGTTGAAGATATTGTTCCGCAGTCAATTGGCTATCAGGTTCAGGAGATTATGAAGGAACTAGGGAGTACTCAATTTTTCCTTGATCCTTTGGAGAAGCAAGTTGGTGATGACATTATTTTCTTGCTCCAACAAGGACGAACATTTAGCAACACTGTTGACAACAGTGAGCTTGAGGCTTTTCACCAAGCTGCTATTAGACTTGGAATAAACTCCTCAAGAGCAGCTCTTGCAGAGAGAAGAGCACTAAAGAAACTAATCGATAGATCTCGCACTGAAGAGGACAAGAGGAAGGAATCAATTGTAGCATATCTTTTGCATCTCATGAGGAAGTATTCCAAGTTATTTAGAAGCGAGGTATCAGATGACAACGATTCACAGGGTTCTGGACCTTGTTCACCCACTGTTCAGAGCTCTCTCGAGGACAGTGGACCTGGTGGAAATGGACAAGCCTTTGAAAGGCAGCTAACAAAGCTTGGTTCTTTTACTTCGAAGCCAAAAAATCGCAGATTGGAACAGATTCCCCTTCCACCTGATGAGTTGAAGTGTCCTATATCATTGCAGCTTATGTATGATCCGGTCATAATTGCTTCCGGGCAAACATATGAAAGAATTTGCATTGAGAAGTGGTTAAGTGATGGCCATAACACCTGCCCAAAAACTCAACAGAAACTCTCTCATCTTTCATTGACACCGAATTACTGTGTCAAGGGCCTGATTGCAAACTGGTGTGAACAGCATGGACTTCCTGTTCCTGATGGGCCTCCAGATAGTCTTGACCTCAATTACTGGAGGCTCGCGTTATCTGAATCAGAGTCTCTAAATTTGTCACCTATGGACACTGTTGGTTCTTGTAAGTTGAAAGATGTTAAAGTTGTTCCGCTAGAAGAAAATGGTACAACTGAGGAGATCAAAGGAAATGTAGTGGATGATAACTCTGCTGAAGACCAAGAGTCAGGTACAAATATGCTTACTAGATACGAACACTATTTGAAAGTCTTGAATGAAGAAGCAGACCTGAGGAAAAAGTCGACGGTTGTGGAGCAAATAAGACTGTTGCTCAAGGATGATGAAGAGGCGAGGATTTTTATGGGAGCTAATGGATTTGTCCAGGGACTTCTACGCTACTTAGAGATAGCTGTGCAAGATCAAAATATCAAGGCTCAGGAAAGTGGAGCAATGGCTCTTTTCAACCTTGCTGTCAACAACGACAGGAACAAGGAGACAATGCTGGGAGAAGGTGTGATTTCATTGTTGGAGGAAATGATTATGAACCCCAATTCCTACGGATCTGCAACGGCCCTCTATCTCAATGTCTCCTGTCTGGAAGAAGCGAAATCTATTATCGGCTCAAGTTGTGCGGTCCCGTTCTTGACTCAACTCCTTCACGCCAATACCGAAACTCTATGCAAGCTTGATGCTCTTCACACACTTTACAATCTATCAACTGTGCCCTCCAATATTCCCAACCTGGTTTCTTCTGGAATCATCAGGGGACTTCAATCCCTTCTTGCAACCCCTCTCGATCGAACATGGACCGAAAAATGCATAGCCATCTTGATAAATTTGGCTTCAAGTGAATTAGGTAGAGATCAAATGTCATCTACTCCAGAACTTATCAGTGGGTTGGCAGCAATATTAGACAATGGCGAACCCATTGAACAGGAACAAGCAGTGGCTTGTCTCTTGATTCTTTGCAATGGGAATGAGAGGTGCAGTGAGATGGTCCTACAGGAAGGCGTAATTCCCGGGCTGGTGTCGATGTCTGTGAACGGGACAGCGAGAGGCAAGGAGAAGGCTCAAAAGCTTCTGATGTTGTTCAGGGAGCAACGACAACGGGAGCCACCGACGCCACCGACACCGACACTGAAACCGACACCAGAACTGACTGAGCAATCAGAGAGTAGCGAGACATCCATGCCTGTGGCAGAATCAAAGCCGCCACTGTGCAAGTCAATTTCAAGAAGAAAACCAGGAAAAGCTTTAAGTTTTTTATGGAAAAGCAAAAGCTATTCAGTGTACCAATGCTAA | 2337 | 43.6 | MDISEVEENLFAASDAKLHGGMCKTLSAIYCKVLTIFPSLEAARPRSRSGIQALCSLHVALEKAKNTLQHCTESSKLYLAITGDSVLLKFEKVKSALQDSLKRVEDIVPQSIGYQVQEIMKELGSTQFFLDPLEKQVGDDIIFLLQQGRTFSNTVDNSELEAFHQAAIRLGINSSRAALAERRALKKLIDRSRTEEDKRKESIVAYLLHLMRKYSKLFRSEVSDDNDSQGSGPCSPTVQSSLEDSGPGGNGQAFERQLTKLGSFTSKPKNRRLEQIPLPPDELKCPISLQLMYDPVIIASGQTYERICIEKWLSDGHNTCPKTQQKLSHLSLTPNYCVKGLIANWCEQHGLPVPDGPPDSLDLNYWRLALSESESLNLSPMDTVGSCKLKDVKVVPLEENGTTEEIKGNVVDDNSAEDQESGTNMLTRYEHYLKVLNEEADLRKKSTVVEQIRLLLKDDEEARIFMGANGFVQGLLRYLEIAVQDQNIKAQESGAMALFNLAVNNDRNKETMLGEGVISLLEEMIMNPNSYGSATALYLNVSCLEEAKSIIGSSCAVPFLTQLLHANTETLCKLDALHTLYNLSTVPSNIPNLVSSGIIRGLQSLLATPLDRTWTEKCIAILINLASSELGRDQMSSTPELISGLAAILDNGEPIEQEQAVACLLILCNGNERCSEMVLQEGVIPGLVSMSVNGTARGKEKAQKLLMLFREQRQREPPTPPTPTLKPTPELTEQSESSETSMPVAESKPPLCKSISRRKPGKALSFLWKSKSYSVYQC | 778 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 91126656 | 91131705 | - | Tan0021427.1 | Tan02g2190 | 744816 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g2190 | 778 | Gene3D | - | 404 | 716 | IPR011989 | - | |
Tan02g2190 | 778 | SMART | Ubox_2 | 282 | 345 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Tan02g2190 | 778 | MobiDBLite | consensus disorder prediction | 224 | 247 | - | - | |
Tan02g2190 | 778 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 278 | 351 | IPR013083 | - | |
Tan02g2190 | 778 | FunFam | RING-type E3 ubiquitin transferase | 278 | 352 | - | - | |
Tan02g2190 | 778 | SUPERFAMILY | RING/U-box | 279 | 355 | - | - | |
Tan02g2190 | 778 | CDD | RING-Ubox_PUB | 280 | 332 | IPR045210 | - | |
Tan02g2190 | 778 | PANTHER | U BOX DOMAIN-CONTAINING | 22 | 713 | - | - | |
Tan02g2190 | 778 | MobiDBLite | consensus disorder prediction | 221 | 254 | - | - | |
Tan02g2190 | 778 | ProSiteProfiles | U-box domain profile. | 278 | 352 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Tan02g2190 | 778 | Pfam | U-box domain | 280 | 349 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Tan02g2190 | 778 | MobiDBLite | consensus disorder prediction | 728 | 744 | - | - | |
Tan02g2190 | 778 | MobiDBLite | consensus disorder prediction | 711 | 756 | - | - | |
Tan02g2190 | 778 | SUPERFAMILY | ARM repeat | 431 | 697 | IPR016024 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1239 | Tan-Chr1:11948897 | Tan02g2190 | Tan-Chr2:91126656 | 5.30E-80 | dispersed | |
Tan01g1240 | Tan-Chr1:11948897 | Tan02g2190 | Tan-Chr2:91126656 | 3.40E-53 | dispersed | |
Tan02g2190 | Tan-Chr2:91126656 | Tan04g0075 | Tan-Chr4:570901 | 9.00E-232 | dispersed | |
Tan02g2190 | Tan-Chr2:91126656 | Tan02g2191 | Tan-Chr2:91126656 | 0.00E+00 | tandem | |
Tan05g0992 | Tan-Chr5:8302042 | Tan02g2190 | Tan-Chr2:91126656 | 7.40E-19 | transposed | |
Tan11g1395 | Tan-Chr11:12377098 | Tan02g2190 | Tan-Chr2:91126656 | 2.30E-10 | transposed | |
Tan02g2190 | Tan-Chr2:91126656 | Tan04g0074 | Tan-Chr4:570901 | 9.00E-232 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g2190 | - | - | - | 0.0 |