Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2212 ATGGCGGAAGAAGAATCCGGAGAGGCTATCCGGCCGGAATTTCCGACGGGAAGAGTGAAGAAGATAATGAAGATCGATAAGGAGGTCGGCAAAGTGAACTCAGAAGCCCTGTTTCTCGTCTCATGCGCCACCGAGCTCTTCCTCAAGCTTCTCGCTGAAAAATCTGCAGAAGTCGCCGCCGAGAAGAAACGGAAGACCGTGAAGCTCGAACACATCCGAATCGCCGTCAAAAGACATCGATCGATCAGTGATTTTCTCCTCGATTCGCTTCCTCTTCCGTCTCAGCCGTCGGATGCTCCGGCGAAGGACGAGAATCGCACTCGCACTGTTGTTGATAAAGCGGTTCCTCAAGGAACCCGTCGAATCGATGATTTCTTTCGTCCGCCAGCAAAGACAACGTCGGCGGAGACCAACGAGTCCTAG 423 52.96 MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES 140
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 91241927 91242474 - Tan0016879.1 Tan02g2212 744838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2212 140 Gene3D Histone, subunit A 1 91 IPR009072 GO:0046982(InterPro)
Tan02g2212 140 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 11 105 IPR050568 GO:0000976(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)
Tan02g2212 140 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 76 IPR003958 -
Tan02g2212 140 SUPERFAMILY Histone-fold 12 91 IPR009072 GO:0046982(InterPro)
Tan02g2212 140 MobiDBLite consensus disorder prediction 89 140 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26817 PF00808 CBFD_NFYB_HMF 4.70E-20 CL0012 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2212 - - - 0.0