Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2217 ATGCAGACAAAGAAAAAAAGTAATGGGAGAAATGCTGTTCGAGAGCTTGTCAGTCCCAAGGTTTTACGATCTCAAAGAAAATATGAAACGATACAAGTTGTAGAAAAGAATATTACTGAACTAATAACATCCTCTGCTAGAAAACGTACTGTTGGTGGTTTGCCATCAAAAAAGAATGGAGAAGAAGTTTTAACTGATTTAAACATTAAATATGATTTTCTACGCAATGAGACTTCTGGTGCTTGTTTGGACCATGATGCAACTGATGGTGCTACCTTGGGCTTCAAGGTTTATGAGGATGACATTGATAACTCTGCATCAGAAACCATATTTTCTCCAGCTTTTCATGTATCTAGCCATGCTGGAGGAGAAGCTCATAATGGAGTTGAGTTTATCAAATTCTTTCAAAGTGGAGATCAAGTGTTCCATTCTGATAACAAACTAGATAATTCAGAATATATTGTTCATGGTGATCAAGATAAGAATTACAATCTAGAGGATGCTGGTCTATCATCTGAAGTATCAGCTATATACCTTGCCATGAAAAATTCTAAGCTGGAGTGTGTCGATGAGCATGCCCATGAGACTATAGCAGCTGAAGTTCACGTGCAGGATGATGAATATGAAGAACTAGACGATTTTGATCCTTATTTCTTCATCAAGAATCTACCTGATTTATCAGCCGTTGTCCCAACTTACCGACCTATGCTACTACCAAAACAGACTCGGAGTTGTCCTCCTACGACACTTGTTTTGGACTTGGACGAAACTCTGGTGCATTCTACACTTGAGCCATGCGTTGATGCCGATTTTACATTCCCTGTAAATTTCAACCTCCAGGAGCATACAGTTTATGTTCGATGTCGGCCTTATCTGAGAGATTTCATGGAAGCGGCTGCCCGACATTTTGAGATCATCATATTTACAGCTAGCCAGAGTATTTATGCAGAACAGCTTCTTAATGTTCTTGATCCAAAGAGGAAAATATTTCGCCACCGTGTTTTCCGTGAATCGTGTGTGTTTGTTGATGGGAACTACCTCAAAGATCTATCAGTTCTTGGGCGTGATTTGGCACGCGTTATTATCGTCGATAATTCGCCACAGGCGTTCGGGTTCCAAGTGGACAATGGAATCCCAATAGAAAGCTGGTTTGATGATCGTTCAGATAAAGAATTGCTTCTATTACTTCCATTTTTGGAAACGTTGGTGGGAGTTGAAGATGTGAGACCCCTTATTGCAAAAAAGTTCAACCTTCGACAGAAAATAGCCGCTGCTGTTTATCCTTCACTGAATTCAAATAGAGATCCCTTTGAAAGGCAAGCCGCTAATATGTATTAA 1338 39.69 MQTKKKSNGRNAVRELVSPKVLRSQRKYETIQVVEKNITELITSSARKRTVGGLPSKKNGEEVLTDLNIKYDFLRNETSGACLDHDATDGATLGFKVYEDDIDNSASETIFSPAFHVSSHAGGEAHNGVEFIKFFQSGDQVFHSDNKLDNSEYIVHGDQDKNYNLEDAGLSSEVSAIYLAMKNSKLECVDEHAHETIAAEVHVQDDEYEELDDFDPYFFIKNLPDLSAVVPTYRPMLLPKQTRSCPPTTLVLDLDETLVHSTLEPCVDADFTFPVNFNLQEHTVYVRCRPYLRDFMEAAARHFEIIIFTASQSIYAEQLLNVLDPKRKIFRHRVFRESCVFVDGNYLKDLSVLGRDLARVIIVDNSPQAFGFQVDNGIPIESWFDDRSDKELLLLLPFLETLVGVEDVRPLIAKKFNLRQKIAAAVYPSLNSNRDPFERQAANMY 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 91257803 91262278 + Tan0010763.3 Tan02g2217 744843

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2217 445 PANTHER DULLARD PROTEIN PHOSPHATASE 59 417 IPR050365 GO:0004721(PANTHER)
Tan02g2217 445 SMART forpap2 246 390 IPR004274 -
Tan02g2217 445 FunFam CTD small phosphatase-like protein 2 236 416 - -
Tan02g2217 445 SUPERFAMILY HAD-like 239 413 IPR036412 -
Tan02g2217 445 Coils Coil 57 77 - -
Tan02g2217 445 Gene3D - 234 417 IPR023214 -
Tan02g2217 445 NCBIfam dullard-like phosphatase domain 248 411 IPR011948 GO:0016791(InterPro)
Tan02g2217 445 CDD HAD_FCP1-like 249 380 - -
Tan02g2217 445 ProSiteProfiles FCP1 homology domain profile. 243 402 IPR004274 -
Tan02g2217 445 Pfam NLI interacting factor-like phosphatase 249 409 IPR004274 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2217 K17616 - - csv:105434637 813.527
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2215 Tan-Chr2:91257803 Tan02g2217 Tan-Chr2:91257803 2.30E-256 dispersed
Tan02g2217 Tan-Chr2:91257803 Tan03g2655 Tan-Chr3:79618515 1.60E-68 dispersed
Tan02g2216 Tan-Chr2:91257803 Tan02g2217 Tan-Chr2:91257803 2.30E-256 tandem
Tan02g2217 Tan-Chr2:91257803 Tan02g2218 Tan-Chr2:91257803 2.30E-256 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g47 . . . . . . . . Cmo05g00116 Cmo12g00562 . Cma05g00110 . Car12g00572 Sed14g1534 Cpe07g00545 . Bhi04g00482 Tan02g2217 Cmetu04g2861 . Hepe08g1373 . Lcy13g2168 . . . . . . . . . Cone17ag0911 Cone20ag0254 . . . . . . . . . . . . . . . . Cma12g00625 . Car05g00095 Cpe11g00090 . . . . . . . . . . . . . . . Lsi08g01564 Csa02g01857 Chy03g01628 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002827 1 3 1 1 2 1 3 1 1 1 1 1 2 2 2 2 1 3 2 1 1 2 2 2 1 2 2 4 5 2 55