Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2236 ATGGACGATGGAGGAGCTTCTCAGCCGGACGACACCGTCATGTCGGAGGCGGCGTCTGTTCCACCACCGCAGCACGACCCGGCGGCGCACCAGCAGCAACACCAGCCGCCGCCGATGGGGATGGAAAATATTCCGGCGACTTTGAGCCATGGGGGCAGATTCATTCAGTACAACATCTTTGGGAACATCTTCGAAGTTACGGCTAAGTACAAGCCTCCCATCATGCCTATTGGCAAAGGCGCTTACGGCATCGTCTGTTCTGCTCTCAACTCTGAGACAAACGAGCACGTGGCGATCAAGAAGATTGCTAATGCGTTTGACAACAAGATCGATGCTAAGAGAACTCTTCGTGAGATCAAGCTGCTTCGACACATGGATCATGAAAACGTTGTTGCAATTAGGGATATCATACCTCCGCCTCTAAGGGAAACATTTAATGATGTTTATATAGCATATGAGCTAATGGATACCGACCTTCATCAAATAATTCGTTCAAACCAAGCATTATCAGAGGAGCATTGCCAGTACTTCCTGTACCAGATTCTTCGTGGATTGAAGTACATACATTCAGCAAATGTTCTGCACAGAGATTTGAAGCCTTCCAATCTGCTATTAAATGCCAACTGTGACCTGAAAATATGCGATTTTGGACTTGCTCGTGTTACTTCTGAAACTGACTTTATGACAGAATATGTGGTTACAAGGTGGTACCGTGCACCAGAGCTCTTACTTAATTCATCCGATTACACAGCAGCTATTGATGTCTGGTCTGTTGGTTGTATTTTTATGGAACTGATGGATCGAAAGCCATTGTTTCCTGGTCGAGATCATGTGCATCAGTTGCGCTTGCTTTTGGAGCTGATTGGCACTCCATCAGAGGCCGATCTTGGTTTCTTGAACGAGAATGCTAAAAGATACATACGACAACTTCCTCATTACCATCGGCAGTCGTTCACCGAAAAGTTTCCACATGTCCATCCTGCAGCCATTGATCTGGTGGAGAAGATGCTAACATTTGATCCAGGACAGAGAATTACCGTGGAAGATGCTCTAGCTCATCCTTATTTGACTTCATTGCACGATATTAGTGATGAGCCTGTCTGCATGACGCCCTTCAGCTTCGATTTCGAGCAGCATGCGCTCACCGAGGAACAGATGAAAGAGCTGATCTACCGAGAGGCACTCGCATTTAACCCTGAGTATCTTCATCAATAA 1215 46.34 MDDGGASQPDDTVMSEAASVPPPQHDPAAHQQQHQPPPMGMENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLLELIGTPSEADLGFLNENAKRYIRQLPHYHRQSFTEKFPHVHPAAIDLVEKMLTFDPGQRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKELIYREALAFNPEYLHQ 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 91350240 91360585 + Tan0010570.1 Tan02g2236 744862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2236 404 MobiDBLite consensus disorder prediction 1 44 - -
Tan02g2236 404 FunFam Mitogen-activated protein kinase 56 165 - -
Tan02g2236 404 ProSitePatterns MAP kinase signature. 106 209 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g2236 404 ProSitePatterns Protein kinases ATP-binding region signature. 77 101 IPR017441 GO:0005524(InterPro)
Tan02g2236 404 ProSiteProfiles Protein kinase domain profile. 71 356 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g2236 404 SMART serkin_6 71 356 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g2236 404 CDD STKc_TEY_MAPK 64 399 - -
Tan02g2236 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g2236 404 Gene3D Phosphorylase Kinase; domain 1 54 393 - -
Tan02g2236 404 Gene3D Transferase(Phosphotransferase) domain 1 155 383 - -
Tan02g2236 404 SUPERFAMILY Protein kinase-like (PK-like) 76 364 IPR011009 -
Tan02g2236 404 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 64 394 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Tan02g2236 404 FunFam Mitogen-activated protein kinase 155 383 - -
Tan02g2236 404 Pfam Protein kinase domain 76 356 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2533 Tan-Chr1:35307169 Tan02g2236 Tan-Chr2:91350240 2.80E-147 dispersed
Tan01g2534 Tan-Chr1:35307169 Tan02g2236 Tan-Chr2:91350240 5.70E-123 dispersed
Tan02g2236 Tan-Chr2:91350240 Tan06g1971 Tan-Chr6:62495526 1.60E-160 dispersed
Tan09g0050 Tan-Chr9:2370843 Tan02g2236 Tan-Chr2:91350240 1.90E-47 dispersed
Tan02g2236 Tan-Chr2:91350240 Tan07g1607 Tan-Chr7:67447195 4.60E-163 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67248 PF00069 Pkinase 3.30E-73 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2236 K14512 - csv:101204301 787.719