Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2252 ATGCTGCTTTCCTTTTCTCCGCCGATACTGAAACCTCCATCCTCACTGAATTCGGATGGAATTTCCACTCCGATGACGCTCAACCTCCCCGATTCCTCCACTCTCACCCGATCGCCACCGACGACACCGCCGATTTCGCCCGTACCTCCACCGCCGGATTGCAGAGCCCTGACGCTTCTCTTCCGCTCGCCTCCAATCCTTCATTGTCTTCCAGCTCCAGCGGAGACCTGCCGGAGAAACAACCTGAGATTCCGTGAAATATTTTGTAGGCGGAATAAGGTCAAAAAGAAGGGGCAAAAGCGAATCCGTCAGCCACGATTTGCATTCATGACCAAAAGCGAAGTTGATCATCTTGAAGATGGCTACCGCTGGCGGAAATATGGACAAAAGGCTGTCAAGAACAGCCCATTTCCTAGGAGTTACTATCGGTGCACAAACAGTAAATGCACAGTGAAGAAAAGGGTAGAACGCTCGTCTGAAGATCCAACGGTTGTGATAACAACTTATGAAGGTCAACACTGTCATCACACCGTTGGATTCCCTCGTGGTGGACTCAACATGGCGCATGAAGCTGCTTTTGGGACTCAATTTTCACCTCAAATGACACAGTTTTTTTACCCTGATCAAGCTCAGCCACCGCCCAGAAATAACGCTCCCATTGTCCATCAGTCGCAGAATTTGCCAACAGTGGCATCAGCCAATGCACTGTTGGAAGAAGACGAGCCAACAAATTCACTGCAAATGGCTTCGGATGATGGCTTACTCGGCGATATTGTGCCCCCAGGCATGCGTAGAAGATAA 801 49.94 MLLSFSPPILKPPSSLNSDGISTPMTLNLPDSSTLTRSPPTTPPISPVPPPPDCRALTLLFRSPPILHCLPAPAETCRRNNLRFREIFCRRNKVKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTVVITTYEGQHCHHTVGFPRGGLNMAHEAAFGTQFSPQMTQFFYPDQAQPPPRNNAPIVHQSQNLPTVASANALLEEDEPTNSLQMASDDGLLGDIVPPGMRRR 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 91543866 91548259 - Tan0018001.3 Tan02g2252 744878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2252 266 MobiDBLite consensus disorder prediction 10 39 - -
Tan02g2252 266 Pfam WRKY DNA -binding domain 119 175 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan02g2252 266 SMART WRKY_cls 118 177 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan02g2252 266 SUPERFAMILY WRKY DNA-binding domain 110 176 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan02g2252 266 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 92 202 IPR044810 GO:0003700(InterPro)
Tan02g2252 266 MobiDBLite consensus disorder prediction 242 266 - -
Tan02g2252 266 Gene3D WRKY domain 105 171 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan02g2252 266 ProSiteProfiles WRKY domain profile. 113 178 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan02g2252 266 MobiDBLite consensus disorder prediction 1 51 - -
Tan02g2252 266 FunFam WRKY transcription factor 57 104 178 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2252 Tan-Chr2:91543866 Tan02g2255 Tan-Chr2:91544086 6.40E-153 dispersed
Tan02g2252 Tan-Chr2:91543866 Tan02g2253 Tan-Chr2:91543866 1.30E-100 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26818 PF03106 WRKY 2.30E-25 CL0274 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2252 - - - 0.0