Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2254 ATGGACTCCGATCCTCCAACTAACTTCTCCACCGCCGATTCCTCCACTAATTGGACCACCAACAACTCCTCACTCCCCGCCTCCGCCGATGCTGCTTTCCTTTTCTCCGCCGATACTGAAACCTCCATCCTCACTGAATTCGGATGGAATTTCCACTCCGATGACGCTCAACCTCCCCGATTCCTCCACTCTCACCCGATCGCCACCGACGACACCGCCGATTTCGCCCGTACCTCCACCGCCGGATTGCAGAGCCCTGACGCTTCTCTTCCGCTCGCCTCCAATCCTTCATTGTCTTCCAGCTCCAGCGGAGACCTGCCGGAGAAACAACCTGAGATTCCGCGGAATAAGGTCAAAAAGAAGGGGCAAAAGCGAATCCGTCAGCCACGATTTGCATTCATGACCAAAAGCGAAGTTGATCATCTTGAAGATGGCTACCGCTGGCGGAAATATGGACAAAAGGCTGTCAAGAACAGCCCATTTCCTAGGAGTTACTATCGGTGCACAAACAGTAAATGCACAGTGAAGAAAAGGGTAGAACGCTCGTCTGAAGATCCAACGGTTGTGATAACAACTTATGAAGGTCAACACTGTCATCACACCGTTGGATTCCCTCGTGGTGGACTCAACATGGCGCATGAAGCTGCTTTTGGGACTCAATTTTCACCTCAAATGACACAGTTTTTTTACCCTGATCAAGCTCAGCCACCGCCCAGAAATAACGCTCCCATTGTCCATCAGTCGCAGAATTTGCCAACAGTGGCATCAGCCAATGCACTGTTGGAAGAAGACGAGCCAACAAATTCACTGCAAATGGCTTCGGATGATGGCTTACTCGGCGATATTGTGCCCCCAGGCATGCGTAGAAGATAA 873 51.2 MDSDPPTNFSTADSSTNWTTNNSSLPASADAAFLFSADTETSILTEFGWNFHSDDAQPPRFLHSHPIATDDTADFARTSTAGLQSPDASLPLASNPSLSSSSSGDLPEKQPEIPRNKVKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTVVITTYEGQHCHHTVGFPRGGLNMAHEAAFGTQFSPQMTQFFYPDQAQPPPRNNAPIVHQSQNLPTVASANALLEEDEPTNSLQMASDDGLLGDIVPPGMRRR 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 91544086 91548259 - Tan0018001.1 Tan02g2254 744880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2254 290 FunFam WRKY transcription factor 57 128 202 - -
Tan02g2254 290 Gene3D WRKY domain 129 195 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan02g2254 290 MobiDBLite consensus disorder prediction 81 107 - -
Tan02g2254 290 Pfam WRKY DNA -binding domain 143 199 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan02g2254 290 SMART WRKY_cls 142 201 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan02g2254 290 MobiDBLite consensus disorder prediction 81 127 - -
Tan02g2254 290 SUPERFAMILY WRKY DNA-binding domain 134 200 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan02g2254 290 MobiDBLite consensus disorder prediction 266 290 - -
Tan02g2254 290 MobiDBLite consensus disorder prediction 1 23 - -
Tan02g2254 290 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 86 226 IPR044810 GO:0003700(InterPro)
Tan02g2254 290 ProSiteProfiles WRKY domain profile. 137 202 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2254 Tan-Chr2:91544086 Tan06g2778 Tan-Chr6:79967303 2.60E-38 dispersed
Tan02g2253 Tan-Chr2:91543866 Tan02g2254 Tan-Chr2:91544086 6.10E-165 tandem
Tan02g2254 Tan-Chr2:91544086 Tan02g2255 Tan-Chr2:91544086 4.00E-100 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26820 PF03106 WRKY 2.60E-25 CL0274 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2254 - - - 0.0