Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2277 ATGGATTCTTCACGAGGGGTAAAGAAGAGAGGCCATGGAAATCGTTCTTGGATAAAGATTGATCAGGAAGGGAACTCAGAGGTTTTGGAACTTGAGAAGGCTACAATAATGAGACATTGTTCTTTACCTTCAAGAGACATGCGACTTTTAGATCCTCTCTTCCTTTGTCCATCCACAATTCTTGGAAGGGAGAAGGCAATTGTTGTCAGTCTTGAGCAAATTCGTTGTATAATCACATCTGATGAGGTTATTCTAATGAACTCCTTAGATGGATGTGCTGCACAGTACAAGTCAGAACTATGCAAGCGTCTCCACGCAAATAAAGATCAATCAGATGATTTGCCCTTTGAATTTAGAGCACTGGAGCTGGCGCTGGAACTTACTTGCTCATTTCTTGACACTCAGGTGAAGGGAATGGAAATGGAGATTTACCCTCTACTGGATGATTTAGCATCTTCAATAAACACCCTTAATCTCGAAAGAGTTCGAAGATTTAAAGGCAACCTCCTGACCTTGACTCAACAAGTGCAAAAGGTGCGTGATGAACTTGAGCATCTGATGGATGATGATGGGGATATGGCTGAGATGCATCTGACAGAGAAGAAACAAAGATTGGAGGCTAACGTCCATCTCGAAACTAGTTTCTTTGGGAAACAACTACCAAAATCAGCTCCTGTTTCGCCAGTGGGTTCTACCAATGGATCTCATAAATTACAAAGGGCTTTTAGCAGTATTGTAAACTCAAGCAGCTTGATGAGTTCATCGAACAGTGGTGATAACATCGAACAATTAGAGATGCTGCTCGAGGCATACTTCGTGGTCATTGACGACATGCTCAGTAAATTGTTATCGCTCAAAGAATCTATAGATGACACAGAAGATCTGATCAACATTAAACTGGGCAATGTTCAGAACCAGCTGATACAATTTCAGTTGCTTTTTACTGCAGCTACATTCTTGGCTACTATGTTTGCGGCGTTAACTGCAGTTTTTGGCATGAATTTTGTCGACGATGTTTTCGAGCATCCGACTTCTTTTCAGTGGATAGTTTACTTGACCTTGATTGCCTGTGTCCTTGTGTATTTCTCTTTTCTATTCTATTTTAGGTACAAGAAAATCTTCCCATTGTAA 1131 40.85 MDSSRGVKKRGHGNRSWIKIDQEGNSEVLELEKATIMRHCSLPSRDMRLLDPLFLCPSTILGREKAIVVSLEQIRCIITSDEVILMNSLDGCAAQYKSELCKRLHANKDQSDDLPFEFRALELALELTCSFLDTQVKGMEMEIYPLLDDLASSINTLNLERVRRFKGNLLTLTQQVQKVRDELEHLMDDDGDMAEMHLTEKKQRLEANVHLETSFFGKQLPKSAPVSPVGSTNGSHKLQRAFSSIVNSSSLMSSSNSGDNIEQLEMLLEAYFVVIDDMLSKLLSLKESIDDTEDLINIKLGNVQNQLIQFQLLFTAATFLATMFAALTAVFGMNFVDDVFEHPTSFQWIVYLTLIACVLVYFSFLFYFRYKKIFPL 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 91660717 91666055 - Tan0020907.3 Tan02g2277 744903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2277 376 Gene3D - 3 88 - -
Tan02g2277 376 Gene3D Magnesium transport protein CorA, transmembrane region 91 307 - -
Tan02g2277 376 FunFam Magnesium transporter MRS2-1 5 88 - -
Tan02g2277 376 Coils Coil 169 189 - -
Tan02g2277 376 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 373 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Tan02g2277 376 Pfam Magnesium transporter MRS2-like 20 206 - -
Tan02g2277 376 CDD Mrs2_Mfm1p-like 17 373 IPR039204 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2275 Tan-Chr2:91660717 Tan02g2277 Tan-Chr2:91660717 1.80E-206 dispersed
Tan02g2277 Tan-Chr2:91660717 Tan04g2493 Tan-Chr4:83806570 1.20E-107 dispersed
Tan02g2276 Tan-Chr2:91660717 Tan02g2277 Tan-Chr2:91660717 1.80E-206 tandem
Tan02g2277 Tan-Chr2:91660717 Tan02g2278 Tan-Chr2:91660717 1.90E-155 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2277 K16075 - csv:101220835 634.024