Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2278 ATGGATTCTTCACGAGGGGTAAAGAAGAGAGGCCATGGAAATCGTTCTTGGATAAAGATTGATCAGGAAGGGAACTCAGAGGTTTTGGAACTTGAGAAGGCTACAATAATGAGACATTGTTCTTTACCTTCAAGAGACATGCGACTTTTAGATCCTCTCTTCCTTTGTCCATCCACAATTCTTGGAAGGGAGAAGGCAATTGTTGTCAGTCTTGAGCAAATTCGTTGTATAATCACATCTGATGAGGTTATTCTAATGAACTCCTTAGATGGATGTGCTGCACAGTACAAGTCAGAACTATGCAAGCGTCTCCACGCAAATAAAGATCAATCAGATGATTTGCCCTTTGAATTTAGAGCACTGGAGCTGGCGCTGGAACTTACTTGCTCATTTCTTGACACTCAGGTGAAGGGAATGGAAATGGAGATTTACCCTCTACTGGATGATTTAGCATCTTCAATAAACACCCTTAATCTCGAAAGAGTTCGAAGATTTAAAGGCAACCTCCTGACCTTGACTCAACAAGTGCAAAAGGTGCGTGATGAACTTGAGCATCTGATGGATGATGATGGGGATATGGCTGAGATGCATCTGACAGAGAAGAAACAAAGATTGGAGGCTAACGTCCATCTCGAAACTAGTTTCTTTGGGAAACAACTACCAAAATCAGCTCCTGTTTCGCCAGTGGGTTCTACCAATGGATCTCATAAATTACAAAGGGCTTTTAGCAGTATTGTAAACTCAAGCAGCTTGATGAGTTCATCGAACAGTGGTGATAACATCGAACAATTAGAGATGCTGCTCGAGGCATACTTCGTGGTCATTGACGACATGCTCAGTAAATTGTTATCGGTATGA 858 41.84 MDSSRGVKKRGHGNRSWIKIDQEGNSEVLELEKATIMRHCSLPSRDMRLLDPLFLCPSTILGREKAIVVSLEQIRCIITSDEVILMNSLDGCAAQYKSELCKRLHANKDQSDDLPFEFRALELALELTCSFLDTQVKGMEMEIYPLLDDLASSINTLNLERVRRFKGNLLTLTQQVQKVRDELEHLMDDDGDMAEMHLTEKKQRLEANVHLETSFFGKQLPKSAPVSPVGSTNGSHKLQRAFSSIVNSSSLMSSSNSGDNIEQLEMLLEAYFVVIDDMLSKLLSV 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 91660717 91666055 - Tan0020907.4 Tan02g2278 744904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2278 285 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 284 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Tan02g2278 285 Coils Coil 169 189 - -
Tan02g2278 285 Gene3D Magnesium transport protein CorA, transmembrane region 91 285 - -
Tan02g2278 285 Gene3D - 3 88 - -
Tan02g2278 285 CDD Mrs2_Mfm1p-like 17 282 IPR039204 -
Tan02g2278 285 FunFam Magnesium transporter MRS2-1 5 88 - -
Tan02g2278 285 Pfam Magnesium transporter MRS2-like 20 206 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2276 Tan-Chr2:91660717 Tan02g2278 Tan-Chr2:91660717 1.90E-155 dispersed
Tan02g2278 Tan-Chr2:91660717 Tan04g2493 Tan-Chr4:83806570 7.00E-81 dispersed
Tan02g2277 Tan-Chr2:91660717 Tan02g2278 Tan-Chr2:91660717 1.90E-155 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2278 K16075 - csv:101220835 491.5