Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan02g2286 | ATGTCTTCTTCTTCACCAAACTTCCAAACCCTTCTTCTCCATTTCCCTTCTTCCATTTCCCAAAGCTTCTCTGCCCTTTTCTTAGCCCTTCTTCTTCTCTCCATTTTCGCCTTCTTCCTACACCCCGGCGGCTTCGCTTGGGCCCTTTCCAAGTCCAAAACCGCCGCCTCTTCCGCCGCCATCCCCGGCCCCGCCGGCCTCCCATTCATCGGCCTTCTCCATATCTTCACTTTCTCCAAAACCCCTCACAGAGCCCTCTCTGCCCTTTCCTCCAAATTCAAAGCACACCCTTTAATGGCCTTCTCTGTTGGCCTCACCAAATTCGTCATTTCAAGCAACCCTGATTTCGCCAAAGAGATTCTCAATAGCGCTTCCTTTGCTGACCGGCCTGTGAAGGAATCTGCTTACGAACTGCTTTTCCACAGAGCAATGGGGTTTGCTCCTTATGGTGAGTATTGGAGGAATTTAAGAAGAATTTCTGCTACCTACATGTTTAGTCCTAAGAGAATAAGTGGTTTTGAAGGGTTTAGAAGGGAAATTGGAGTGAAATTGATGGGGGAAGTTGAGAAATCCATGGGGTTGAAAGGGGAAGTGAGAGTTAAGGAGATTCTTCATTTTGGGTCTTTGAATAATGTTATGATGACTGTTTTTGGAAAGTGTTATGAGTTTAATGAAATGGGAAATGGGGATGATGGGATTGAGCTTGAGGAATTAGTGAGTGAAGGGTATGAATTGCTTGGGATTTTTAATTGGAGTGATCATTTTCCATTTTTGTGTTGGTTGGATTTACAAGGTGTGAGGAAAAGGTGTAAGGTTTTGGCTTCTAAAGTGAATGTGTTTGTGGGGAAAATCATTGAGGAACATAGAATGAAGAGGAAAGTTATGGGACATCAACAAGAACATGAACAAGAACATAATAGAGACTTTGTTGATGTCCTACTTGATTTGGAGAAAGAGGACAAGCTCTCAGATTCTGATATGATTGCTGTTCTTTGGGAAATGATATTTCGAGGAACAGACACAGTGGCCATACTTATGGAATGGATTTTAGCACGAATGGTTATACACCCAGAAATCCAAACCAAAGCTCAAAACGAAATCGATTCAGTAATAGGCCAAAAATTGAGAACCATTTCAGATTCTGATATCCAAAATCTTCCATTTCTTCAATCCATTGTCAAGGAATGTTTAAGAATGCACCCACCAGGGCCACTTCTATCATGGGCCAGGCTCGCCATCGACGACGTGCACGTCGGGGGGAGGCTGATCCCGGCAGGGACGACGGCGATGGTGAACATGTGGGGGATAACACACAATGAAAAAATTTGGAAAGAGGCTGAAAAGTTTGAGCCAAATAGGTTCATGGAAGAGGAAATAAGGGTAATGGGAAGTGATTTGAGATTGGCTCCATTTGGGGCAGGGAGAAGAGTCTGCCCTGGAAAAGCAATGGGATTGGCCACTGTTCATCTTTGGTTGGCTCAGTTGCTTCAAGCTTTTAAATGGCTTCCTTCTGAAAAAGCCATTAATAATGGTGTTGACTTGTCAGAATGCCTTAAACTCTCTTTGGAAATGGAAACTCCATTGGTTTGCAGAGCTGTTCCTAGGGTTGGTTGA | 1614 | 43.93 | MSSSSPNFQTLLLHFPSSISQSFSALFLALLLLSIFAFFLHPGGFAWALSKSKTAASSAAIPGPAGLPFIGLLHIFTFSKTPHRALSALSSKFKAHPLMAFSVGLTKFVISSNPDFAKEILNSASFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATYMFSPKRISGFEGFRREIGVKLMGEVEKSMGLKGEVRVKEILHFGSLNNVMMTVFGKCYEFNEMGNGDDGIELEELVSEGYELLGIFNWSDHFPFLCWLDLQGVRKRCKVLASKVNVFVGKIIEEHRMKRKVMGHQQEHEQEHNRDFVDVLLDLEKEDKLSDSDMIAVLWEMIFRGTDTVAILMEWILARMVIHPEIQTKAQNEIDSVIGQKLRTISDSDIQNLPFLQSIVKECLRMHPPGPLLSWARLAIDDVHVGGRLIPAGTTAMVNMWGITHNEKIWKEAEKFEPNRFMEEEIRVMGSDLRLAPFGAGRRVCPGKAMGLATVHLWLAQLLQAFKWLPSEKAINNGVDLSECLKLSLEMETPLVCRAVPRVG | 537 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 91718849 | 91721525 | - | Tan0009480.1 | Tan02g2286 | 744912 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan02g2286 | 537 | CDD | CYP78 | 94 | 528 | - | - | |
| Tan02g2286 | 537 | SUPERFAMILY | Cytochrome P450 | 61 | 535 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g2286 | 537 | PANTHER | CYTOCHROME P450 78A7-RELATED | 18 | 532 | IPR051996 | - | |
| Tan02g2286 | 537 | Pfam | Cytochrome P450 | 62 | 507 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g2286 | 537 | Gene3D | Cytochrome P450 | 47 | 529 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g2286 | 537 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 471 | 480 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan02g2286 | 537 | FunFam | Cytochrome P450 78A5 | 53 | 535 | - | - | |
| Tan02g2286 | 537 | PRINTS | E-class P450 group I signature | 326 | 343 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g2286 | 537 | PRINTS | E-class P450 group I signature | 478 | 501 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g2286 | 537 | PRINTS | E-class P450 group I signature | 207 | 225 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g2286 | 537 | PRINTS | E-class P450 group I signature | 390 | 408 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g2286 | 537 | PRINTS | E-class P450 group I signature | 468 | 478 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g2286 | 537 | PRINTS | E-class P450 group I signature | 432 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g2286 | 537 | PRINTS | E-class P450 group I signature | 346 | 372 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g2286 | 537 | PRINTS | P450 superfamily signature | 391 | 402 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g2286 | 537 | PRINTS | P450 superfamily signature | 337 | 354 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g2286 | 537 | PRINTS | P450 superfamily signature | 469 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g2286 | 537 | PRINTS | P450 superfamily signature | 478 | 489 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan02g2286 | Tan-Chr2:91718849 | Tan05g2343 | Tan-Chr5:74875006 | 7.50E-193 | dispersed | |
| Tan02g2286 | Tan-Chr2:91718849 | Tan08g1279 | Tan-Chr8:42694608 | 1.80E-69 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan02g2286 | K20619 | - | csv:101221468 | 832.787 |