Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g2310 | ATGAGAACGGGGAAAAGCAATCATGAAGACGAAGAGTACGACGAGGACGAGCTGGTTGCTAAAAAAGAGGGGCCTGCTTCTACTTCCAACGCTAATAGTAACATCGGAAACAACAAAGATGCGAAGAACAATGATAAGGCTAATGCCATACGGTCGAAGCACTCTGTCACGGAACAGCGCAGAAGAAGCAAGATTAATGAGAGATTCCAGATTTTGAGAGATCTTATACCTCACAGCGACCAAAAGAGAGATACCGCGTCATTCTTATTGGAGGTGATCGAGTATGTACAGTATTTACAGGAAAAGGTGCAGAAGTATGAGGGTTCATATCAGAATTGGAGTGGGGAACCTACTAAGTTGATACCATGGAGAAATAGTCATTGGCGCATGCAGACTTTTGTTGGCCATCCACAGTCTGTAAAAAATGGTTCTGCTTCAGGACCAACGTATTCAGGGAAGTTTGATGACAACAACATTCCAATTTCACCAGCCATGCTTGGAAGCTCACAAAACCCTCTCGAGTCCCATGCAGGCAGAGATATTCTTCAGGATGCTGACATAACAAATAAAGTTCCACTTCCCATGTCTCTGGAAGGAAATATACATACTTCTATCCGTAGTGTTGGCGTGCTTGATCAATCTCTCCACATTCCAATTTCTGATGCACAGACAACGGAGTGTCCCATCACCAACAATGCATCAAACCAACTGGAGGAGACTGCTATTGAAGGGGGCACAATAAGCGTTTCAAGTCTTTATTCAGAAGGGTTATTGAACAGCTTGACTCAAGCTCTGCAGAATACTGGACTGGATTTGTCACAGGCTAGTATCTCCGTTCAGATTGATCTGGGCAAGAGAGCGAATAAGGGGATGCCATTTGGAACGCCTATTTTTAAGGAAACTGGGAATCCTCCCTCCGGCCACCCAACAATGGTGCATGTAGGGGACCTGGGCAGTGGAGACGACTCAGATCAAGCTAAAAAGCGGCTAAGGACATGA | 999 | 45.15 | MRTGKSNHEDEEYDEDELVAKKEGPASTSNANSNIGNNKDAKNNDKANAIRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQNWSGEPTKLIPWRNSHWRMQTFVGHPQSVKNGSASGPTYSGKFDDNNIPISPAMLGSSQNPLESHAGRDILQDADITNKVPLPMSLEGNIHTSIRSVGVLDQSLHIPISDAQTTECPITNNASNQLEETAIEGGTISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPPSGHPTMVHVGDLGSGDDSDQAKKRLRT | 332 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 91874143 | 91878950 | - | Tan0014807.1 | Tan02g2310 | 744936 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g2310 | 332 | MobiDBLite | consensus disorder prediction | 44 | 62 | - | - | |
Tan02g2310 | 332 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 47 | 119 | IPR036638 | GO:0046983(InterPro) | |
Tan02g2310 | 332 | SMART | finulus | 55 | 105 | IPR011598 | GO:0046983(InterPro) | |
Tan02g2310 | 332 | FunFam | BHLH domain class transcription factor | 47 | 119 | - | - | |
Tan02g2310 | 332 | MobiDBLite | consensus disorder prediction | 25 | 43 | - | - | |
Tan02g2310 | 332 | MobiDBLite | consensus disorder prediction | 302 | 332 | - | - | |
Tan02g2310 | 332 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 49 | 99 | IPR011598 | GO:0046983(InterPro) | |
Tan02g2310 | 332 | CDD | bHLH_AtBIM_like | 48 | 124 | - | - | |
Tan02g2310 | 332 | Gene3D | - | 47 | 119 | IPR036638 | GO:0046983(InterPro) | |
Tan02g2310 | 332 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
Tan02g2310 | 332 | Pfam | Helix-loop-helix DNA-binding domain | 51 | 100 | IPR011598 | GO:0046983(InterPro) | |
Tan02g2310 | 332 | PANTHER | BES1-INTERACTING MYC-LIKE PROTEIN | 3 | 332 | IPR044295 | GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g2310 | Tan-Chr2:91874143 | Tan09g1999 | Tan-Chr9:70699606 | 1.40E-61 | dispersed | |
Tan02g2310 | Tan-Chr2:91874143 | Tan09g1998 | Tan-Chr9:70699606 | 1.40E-61 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26825 | PF00010 | HLH | 1.80E-13 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g2310 | - | - | - | 0.0 |