Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g2324 | ATGGCTACTGAGGGCAGTCCCAGGACTGATATCTCAACAGATGGGGACACAGACGAAAAAAGCCGGAGGTCTGATGATAGAGGCCAAGCACTTATTATGGCTTCAGATTCTAGTGACAGATCAAAGGATAAAACTGATCAGAAGACTCTTCGCCGGCTAGCACAAAATCGTGAGGCTGCTAGGAAAAGCCGATTGAGGAAAAAAGCATATGTTCAACAATTAGAGAGCAGCCGTTTAAAGTTGACACAACTCGAGCAGGAGCTTCAGCGAGCACGGCAGCAGGGAATTTTCATATCAAGCTCAGGTGACCAGACCCATTCAATGAGTGGAAATGGAGCCATGGCATTTGATGTAGAATATGCTCAATGGCTTGAAGATCACAACCGTCAAATGAACGAATTGAGATCGGCTGTTAATTCTCATGCAAGTGACCCGGAACTTCGTATTGTTGTCGATGGCATCTTGGTTCATTATGATGAGCTTTTCAGGCTCAAGGGAAATGCAGCAAAAGCTGACGTTTTCCATTTATTATCAGGCATGTGGAAAACACCTGCAGAAAGATGTTTTCTTTGGCTTGGGGGTTTTCGTTCATCCGAGCTTCTAAAGCTTCTTGTAAATCAACTGGAGCCTCTAACAGAACAGCAGTTGGTGGGAATCACAAACTTGCAGCAATCATCACAGCAGGCAGAAGATGCATTATCACAAGGGATGGAGGCCTTGCAACAGTCCCTGGCAGAGACATTGTCGAGTGGATCGCTTGGCTCCTCAGGTTCGTCAGGGAACGTTGCAAACTACATGGGTCAAATGGCCATGGCCATGGGTAAACTCGGGACGCTCGAGGGTTTTATACGCCAAGCCGACAATCTGCGACAACAGACACTTCAACAAATGCACCGAATATTGACAACTCGTCAGTCCGCTCGTGCGCTTCTCGCCATACATGACTACTTCTCCAGGCTACGAGCTCTTAGTTCGCTCTGGCTTGCTCGTCCCAGAGAGTAA | 1002 | 47.31 | MATEGSPRTDISTDGDTDEKSRRSDDRGQALIMASDSSDRSKDKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQTHSMSGNGAMAFDVEYAQWLEDHNRQMNELRSAVNSHASDPELRIVVDGILVHYDELFRLKGNAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLAETLSSGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRE | 333 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 91985617 | 91991255 | - | Tan0013099.2 | Tan02g2324 | 744950 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g2324 | 333 | Pfam | Seed dormancy control | 130 | 205 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Tan02g2324 | 333 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 51 | 66 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2324 | 333 | FunFam | BZIP family transcription factor | 47 | 96 | - | - | |
Tan02g2324 | 333 | Pfam | bZIP transcription factor | 48 | 88 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2324 | 333 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
Tan02g2324 | 333 | Coils | Coil | 67 | 94 | - | - | |
Tan02g2324 | 333 | ProSiteProfiles | DOG1 domain profile. | 113 | 330 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Tan02g2324 | 333 | SMART | brlzneu | 44 | 107 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2324 | 333 | Gene3D | - | 47 | 99 | - | - | |
Tan02g2324 | 333 | MobiDBLite | consensus disorder prediction | 11 | 29 | - | - | |
Tan02g2324 | 333 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 23 | 333 | - | - | |
Tan02g2324 | 333 | SUPERFAMILY | Leucine zipper domain | 48 | 91 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2324 | 333 | Coils | Coil | 124 | 144 | - | - | |
Tan02g2324 | 333 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 46 | 90 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g2324 | Tan-Chr2:91985617 | Tan02g2326 | Tan-Chr2:91985617 | 3.80E-171 | dispersed | |
Tan02g2323 | Tan-Chr2:91985617 | Tan02g2324 | Tan-Chr2:91985617 | 3.80E-171 | tandem | |
Tan02g2324 | Tan-Chr2:91985617 | Tan02g2325 | Tan-Chr2:91985617 | 3.80E-171 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26827 | PF14144 | DOG1 | 6.90E-32 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g2324 | K14431 | - | csv:101213210 | 586.26 |