Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2330 ATGGCTACTGAGGGCAGTCCCAGGACTGATATCTCAACAGATGGGGACACAGACGAAAAAAGCCGGAGGTCTGATGATAGAGGCCAAGCACTTATTATGGCTTCAGATTCTAGTGACAGATCAAAGGATAAAACTGATCAGAAGACTCTTCGCCGGCTAGCACAAAATCGTGAGGCTGCTAGGAAAAGCCGATTGAGGAAAAAAGCATATGTTCAACAATTAGAGAGCAGCCGTTTAAAGTTGACACAACTCGAGCAGGAGCTTCAGCGAGCACGGCAGCAGGGAATTTTCATATCAAGCTCAGGTGACCAGACCCATTCAATGAGTGGAAATGGAGCCATGGCATTTGATGTAGAATATGCTCAATGGCTTGAAGATCACAACCGTCAAATGAACGAATTGAGATCGGCTGTTAATTCTCATGCAAGTGACCCGGAACTTCGTATTGTTGTCGATGGCATCTTGGTTCATTATGATGAGCTTTTCAGGCTCAAGGGAAATGCAGCAAAAGCTGACGTTTTCCATTTATTATCAGGCATGTGGAAAACACCTGCAGAAAGATGTTTTCTTTGGCTTGGGGGTTTTCGTTCATCCGAGCTTCTAAAGCTTCTTGTAAATCAACTGGAGCCTCTAACAGAACAGCAGTTGGTGGGAATCACAAACTTGCAGCAATCATCACAGCAGGCAGAAGATGCATTATCACAAGGGATGGAGGCCTTGCAACAGTCCCTGGCAGAGACATTGTCGAGTGGATCGCTTGGCTCCTCAGGTTCGTCAGGGAACGTTGCAAACTACATGGGTCAAATGGCCATGGCCATGGGTAAACTCGGGACGCTCGAGGGTTTTATACGCCAAGCCGACAATCTGCGACAACAGACACTTCAACAAATGCACCGAATATTGACAACTCGTCAGTCCGCTCGTGCGCTTCTCGCCATACATGACTACTTCTCCAGGCTACGAGCTCTTAGTTCGCTCTGGCTTGCTCGTCCCAGAGAGTAA 1002 47.31 MATEGSPRTDISTDGDTDEKSRRSDDRGQALIMASDSSDRSKDKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQTHSMSGNGAMAFDVEYAQWLEDHNRQMNELRSAVNSHASDPELRIVVDGILVHYDELFRLKGNAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLAETLSSGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRE 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 91985617 91991255 - Tan0013099.8 Tan02g2330 744956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2330 333 Pfam Seed dormancy control 130 205 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Tan02g2330 333 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 51 66 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2330 333 FunFam BZIP family transcription factor 47 96 - -
Tan02g2330 333 Pfam bZIP transcription factor 48 88 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2330 333 MobiDBLite consensus disorder prediction 1 49 - -
Tan02g2330 333 Coils Coil 67 94 - -
Tan02g2330 333 ProSiteProfiles DOG1 domain profile. 113 330 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Tan02g2330 333 SMART brlzneu 44 107 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2330 333 Gene3D - 47 99 - -
Tan02g2330 333 MobiDBLite consensus disorder prediction 11 29 - -
Tan02g2330 333 PANTHER TRANSCRIPTION FACTOR TGA9 23 333 - -
Tan02g2330 333 SUPERFAMILY Leucine zipper domain 48 91 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2330 333 Coils Coil 124 144 - -
Tan02g2330 333 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 46 90 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2328 Tan-Chr2:91985617 Tan02g2330 Tan-Chr2:91985617 3.80E-171 dispersed
Tan02g2330 Tan-Chr2:91985617 Tan04g0514 Tan-Chr4:4258311 1.10E-141 dispersed
Tan02g2329 Tan-Chr2:91985617 Tan02g2330 Tan-Chr2:91985617 3.80E-171 tandem
Tan02g2330 Tan-Chr2:91985617 Tan02g2331 Tan-Chr2:91985617 3.80E-171 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26833 PF14144 DOG1 6.90E-32 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2330 K14431 - csv:101213210 586.26