Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2393 ATGGAGAAGGAGAGGGAGCACCTTGTTTATTTGGCCAGACTTGCCGAACAAGCAGAGAGATATGATGAAATGGTGGAAATGATGAAGAGCGTCGCAAAGTTGGACGTAGAACTTACTGTGGAGGAGAGAAACCTGGTCTCTGTGGGATATAAGAACGTTATTGGGGCGAGAAGAGCCTCGTGGCGTATCCTATCTTCCATCGAACAGAAGGAGGAAGGAAAGAAGAACGAGGTAAATGTGAAGAGGGTAAAGGAGTACAGGCAGAGGGTTGAAGACGAACTGGCGAGAATTTGCCAAGACATCTTATCAGTTGTTGACAAGCATCTCATTCCATCGTCATCCTCTGGAGAATCTAATGTTTTTTACTATAAGATGAAAGGGGATTATAATCGATACTTGGCGGAGTTTAAATCTGGCCAGGAACGTGAAGAAGCTGCTGATCAGTCAATGAAGGCCTACGAGTCTGCCTCAAGCATCGCCACCTCTGATCTACCTCCAACTCATCCCATTAGACTTGGCTTGGCGCTAAACTTTTCTGTTTTCTACTATGAGATATTAAATTCCCCAGAGAGGGCATGCCACCTTGCTAAACAAGCTTTTGATGATGCCATAGCTGAGCTCGACGGCCTCAATGAAGAATCCTACAAGGACAGTACCCTCATCATGCAGCTGCTGAGGGATAATCTCACATTGTGGACCTCAGATCTCCCAGATGAGGGAGGTGAGCAATCTAAGGCTGCTGATGAACCTTGA 753 46.22 MEKEREHLVYLARLAEQAERYDEMVEMMKSVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEGKKNEVNVKRVKEYRQRVEDELARICQDILSVVDKHLIPSSSSGESNVFYYKMKGDYNRYLAEFKSGQEREEAADQSMKAYESASSIATSDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDDAIAELDGLNEESYKDSTLIMQLLRDNLTLWTSDLPDEGGEQSKAADEP 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 92527255 92529631 - Tan0020821.1 Tan02g2393 745019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2393 250 PIRSF 14-3-3 1 247 IPR000308 -
Tan02g2393 250 PANTHER 14-3-3 PROTEIN 4 238 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Tan02g2393 250 SMART 1433_4 5 246 IPR023410 -
Tan02g2393 250 FunFam 14-3-3 protein epsilon 1 246 - -
Tan02g2393 250 SUPERFAMILY 14-3-3 protein 4 235 IPR036815 -
Tan02g2393 250 ProSitePatterns 14-3-3 proteins signature 2. 215 234 IPR023409 -
Tan02g2393 250 Gene3D - 1 246 IPR036815 -
Tan02g2393 250 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Tan02g2393 250 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Tan02g2393 250 PRINTS 14-3-3 protein zeta signature 179 205 IPR000308 -
Tan02g2393 250 PRINTS 14-3-3 protein zeta signature 206 235 IPR000308 -
Tan02g2393 250 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Tan02g2393 250 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Tan02g2393 250 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Tan02g2393 250 Pfam 14-3-3 protein 11 233 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0163 Tan-Chr2:1433095 Tan02g2393 Tan-Chr2:92527255 3.80E-110 dispersed
Tan02g0164 Tan-Chr2:1433095 Tan02g2393 Tan-Chr2:92527255 1.90E-100 dispersed
Tan02g2393 Tan-Chr2:92527255 Tan04g1848 Tan-Chr4:57508121 1.80E-93 dispersed
Tan04g1015 Tan-Chr4:9034929 Tan02g2393 Tan-Chr2:92527255 3.60E-108 transposed
Tan01g3788 Tan-Chr1:102710782 Tan02g2393 Tan-Chr2:92527255 2.80E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2393 K06630 - csv:101222677 462.611