Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2410 ATGGCTGCCGCTCCTTCTGTTCGTGAGGAGAATGTTTACATGGCCAAGCTGGCCGAGCAGGCCGAGCGTTACGAGGAGATGGTTGAGTTCATGGAGAAGGTTTCCGCTTCCATCGACAAGGAGGAGCTCACCGTTGAGGAGAGAAACCTCCTCTCCGTTGCCTACAAGAACGTTATCGGCGCTCGCAGGGCCTCCTGGCGTATCATTTCCTCCATTGAGCAGAAGGAGGAGAGCCGTGGCAACGATGACCATGTCTCTGTGATCCGTGACTATAGATCCAAAATTGAGAGTGAGCTCTCCAATATCTGCGATGGAATCCTCAAACTCCTCGATTCCAGACTCATTCCATCCGCCGCCTCCGGAGATTCCAAGGTCTTTTACCTCAAAATGAAGGGCGATTACCATAGATATCTCGCCGAATTCAAAACCGGTGCCGAAAGGAAGGAAGCCGCCGAAAGTACCCTCACTGCTTACAAAGCCGCTCAGGATATTGCAAATGCTGAGCTACCTCCTACACATCCGATCCGACTTGGATTGGCTCTTAACTTCTCTGTATTCTACTATGAAATTTTGAATTCCCCTGATCGTGCCTGCAGTCTTGCGAAACAGGCGTTTGATGAAGCTATCGCTGAATTGGATACCCTCGGCGAGGAATCCTACAAAGATAGTACTTTGATTATGCAACTTCTTCGCGATAACCTCACTCTCTGGACCTCGGACATGCAGGATGACGGTGCCGATGAGATTAAAGAAGCTCCCCCAAAGCGTGAGGATGAAAAGCAGTGA 786 50.25 MAAAPSVREENVYMAKLAEQAERYEEMVEFMEKVSASIDKEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRDYRSKIESELSNICDGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPPKREDEKQ 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 92708655 92711062 + Tan0011989.1 Tan02g2410 745036

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2410 261 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Tan02g2410 261 MobiDBLite consensus disorder prediction 243 261 - -
Tan02g2410 261 Coils Coil 14 34 - -
Tan02g2410 261 SMART 1433_4 8 251 IPR023410 -
Tan02g2410 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Tan02g2410 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Tan02g2410 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Tan02g2410 261 MobiDBLite consensus disorder prediction 242 261 - -
Tan02g2410 261 SUPERFAMILY 14-3-3 protein 8 240 IPR036815 -
Tan02g2410 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Tan02g2410 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Tan02g2410 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Tan02g2410 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Tan02g2410 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Tan02g2410 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Tan02g2410 261 Gene3D - 2 251 IPR036815 -
Tan02g2410 261 PIRSF 14-3-3 2 250 IPR000308 -
Tan02g2410 261 FunFam 14-3-3 protein epsilon 4 251 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2410 K06630 - - csv:101220164 506.523
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2410 Tan-Chr2:92708655 Tan04g1848 Tan-Chr4:57508121 1.70E-118 dispersed
Tan01g3801 Tan-Chr1:102912002 Tan02g2410 Tan-Chr2:92708655 1.60E-129 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g442 . . Bda01g00893 Bda03g00486 . Bpe04g00439 . . Cmo05g00534 Cmo12g00129 Cma01g01616 Cma09g00568 Car01g01232 Car12g00154 Sed04g0158 Cpe06g00431 Cpe07g00142 Bhi04g00777 Tan02g2410 Cmetu03g2141 . Hepe10g0481 . Lcy13g1545 Cla08g01123 Cam08g1580 Cec08g1150 Cco08g1276 Clacu08g1281 . Cre08g1063 . . . . Lsi04g02246 Csa03g04457 Chy04g00245 Cme03g01852 Blo17g00112 Blo18g00127 . Bda13g01393 Bpe02g01128 Bpe14g00462 Bma01g01396 Bma02g00132 Sed05g1594 Cmo01g01661 Cmo09g00555 Cma12g00167 Cma05g00507 Car05g00457 Car09g00495 Cpe11g00447 Cpe02g00365 Bhi09g02451 Tan01g3801 Cmetu04g2791 . Hepe01g2137 Mch11g0676 . Cla11g01392 Cam11g1448 Cec11g1476 Cco11g1473 Clacu11g1607 Cmu11g1426 Cre11g1846 Lsi08g00980 Csa02g02163 Chy03g01354 Cme04g00274
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tan02g2410 . 4 242 14-3-3 family AT4G09000 90.4 1.6e-118 423.3
Tan01g3801 . 5 242 14-3-3 family AT4G09000 89.9 8.0e-118 421.0
Tan04g1848 . 6 241 14-3-3 family AT4G09000 86.4 5.0e-112 401.7
Tan04g1849 . 6 241 14-3-3 family AT4G09000 86.4 5.0e-112 401.7
Tan02g2500 . 10 246 14-3-3 family AT4G09000 74.3 5.4e-98 355.1
Tan02g0163 . 4 238 14-3-3 family AT4G09000 72.2 5.2e-93 338.6
Tan04g1015 . 4 239 14-3-3 family AT4G09000 72.3 1.7e-91 333.6
Tan02g2268 . 4 239 14-3-3 family AT4G09000 71.8 1.1e-90 330.9
Tan02g2269 . 4 239 14-3-3 family AT4G09000 71.8 1.1e-90 330.9
Tan02g2393 . 5 236 14-3-3 family AT4G09000 70.5 7.0e-90 328.2
Tan01g3788 . 5 236 14-3-3 family AT4G09000 71.8 6.6e-88 321.6
Tan02g0162 . 1 213 14-3-3 family AT4G09000 72.1 4.4e-84 308.9
Tan02g0164 . 1 213 14-3-3 family AT4G09000 72.1 4.4e-84 308.9
Tan02g2410 . 6 261 14-3-3 family AT1G78300 89.5 3.6e-124 441.8
Tan01g3801 . 5 258 14-3-3 family AT1G78300 90.2 7.9e-124 440.7
Tan04g1848 . 6 253 14-3-3 family AT1G78300 87.5 3.2e-117 418.7
Tan04g1849 . 6 253 14-3-3 family AT1G78300 87.5 3.2e-117 418.7
Tan02g2500 . 11 247 14-3-3 family AT1G78300 75.5 1.0e-99 360.5
Tan02g0163 . 7 255 14-3-3 family AT1G78300 70.1 2.9e-94 342.4
Tan04g1015 . 8 255 14-3-3 family AT1G78300 71.2 4.2e-93 338.6
Tan02g2268 . 8 257 14-3-3 family AT1G78300 70.2 2.8e-92 335.9
Tan02g2393 . 1 250 14-3-3 family AT1G78300 68.3 2.8e-92 335.9
Tan02g2269 . 8 242 14-3-3 family AT1G78300 72.6 2.0e-90 329.7
Tan01g3788 . 1 248 14-3-3 family AT1G78300 68.4 2.4e-88 322.8
Tan02g0162 . 14 230 14-3-3 family AT1G78300 71.0 2.5e-85 312.8
Tan02g0164 . 14 230 14-3-3 family AT1G78300 71.0 2.5e-85 312.8
Tan04g1848 . 6 259 14-3-3 family AT5G38480 90.2 3.0e-123 438.7
Tan04g1849 . 6 259 14-3-3 family AT5G38480 90.2 3.0e-123 438.7
Tan02g2410 . 6 252 14-3-3 family AT5G38480 86.2 3.9e-115 411.8
Tan01g3801 . 6 252 14-3-3 family AT5G38480 85.0 3.3e-114 408.7
Tan02g2500 . 10 251 14-3-3 family AT5G38480 74.4 2.1e-97 352.8
Tan04g1015 . 8 255 14-3-3 family AT5G38480 73.2 4.9e-94 341.7
Tan02g2393 . 5 247 14-3-3 family AT5G38480 72.7 2.4e-93 339.3
Tan02g0163 . 7 247 14-3-3 family AT5G38480 72.4 4.2e-93 338.6
Tan02g2268 . 8 245 14-3-3 family AT5G38480 73.8 1.6e-92 336.7
Tan02g2269 . 8 243 14-3-3 family AT5G38480 73.9 4.6e-92 335.1
Tan01g3788 . 5 242 14-3-3 family AT5G38480 71.7 4.0e-88 322.0
Tan02g0162 . 1 222 14-3-3 family AT5G38480 71.9 1.9e-85 313.2
Tan02g0164 . 1 222 14-3-3 family AT5G38480 71.9 1.9e-85 313.2
Tan02g2410 . 3 242 14-3-3 family AT1G35160 90.4 5.1e-119 424.9
Tan01g3801 . 4 242 14-3-3 family AT1G35160 89.5 4.3e-118 421.8
Tan04g1848 . 6 240 14-3-3 family AT1G35160 86.4 2.3e-111 399.4
Tan04g1849 . 6 240 14-3-3 family AT1G35160 86.4 2.3e-111 399.4
Tan02g2500 . 1 246 14-3-3 family AT1G35160 73.6 1.0e-98 357.5
Tan02g0163 . 2 237 14-3-3 family AT1G35160 71.8 1.4e-92 337.0
Tan04g1015 . 8 239 14-3-3 family AT1G35160 73.5 9.1e-92 334.3
Tan02g2268 . 8 239 14-3-3 family AT1G35160 72.6 1.7e-90 330.1
Tan02g2269 . 8 239 14-3-3 family AT1G35160 72.6 1.7e-90 330.1
Tan02g2393 . 5 236 14-3-3 family AT1G35160 70.1 6.5e-90 328.2
Tan01g3788 . 5 236 14-3-3 family AT1G35160 71.8 8.0e-88 321.2
Tan02g0162 . 1 212 14-3-3 family AT1G35160 71.0 7.7e-83 304.7
Tan02g0164 . 1 212 14-3-3 family AT1G35160 71.0 7.7e-83 304.7
Tan04g1848 . 5 254 14-3-3 family AT5G16050 86.0 1.3e-116 416.8
Tan04g1849 . 5 254 14-3-3 family AT5G16050 86.0 1.3e-116 416.8
Tan02g2410 . 3 253 14-3-3 family AT5G16050 78.9 2.8e-108 389.0
Tan01g3801 . 4 254 14-3-3 family AT5G16050 79.0 1.7e-105 379.8
Tan02g2500 . 10 248 14-3-3 family AT5G16050 71.1 4.9e-92 335.1
Tan02g0163 . 1 246 14-3-3 family AT5G16050 65.5 7.5e-85 311.2
Tan02g2268 . 3 246 14-3-3 family AT5G16050 65.9 9.8e-85 310.8
Tan04g1015 . 3 246 14-3-3 family AT5G16050 65.0 9.8e-85 310.8
Tan02g2269 . 3 244 14-3-3 family AT5G16050 66.4 1.7e-84 310.1
Tan02g2393 . 2 247 14-3-3 family AT5G16050 64.9 1.7e-84 310.1
Tan02g0162 . 14 221 14-3-3 family AT5G16050 71.8 1.7e-81 300.1
Tan02g0164 . 14 221 14-3-3 family AT5G16050 71.8 1.7e-81 300.1
Tan01g3788 . 5 239 14-3-3 family AT5G16050 65.8 4.7e-79 292.0
Tan02g2500 . 9 246 14-3-3 family AT5G10450 87.4 6.0e-114 407.9
Tan02g2410 . 3 251 14-3-3 family AT5G10450 77.2 1.1e-104 377.1
Tan01g3801 . 1 242 14-3-3 family AT5G10450 79.0 9.6e-104 374.0
Tan04g1848 . 7 259 14-3-3 family AT5G10450 73.6 1.4e-102 370.2
Tan04g1849 . 7 259 14-3-3 family AT5G10450 73.6 1.4e-102 370.2
Tan02g0163 . 1 238 14-3-3 family AT5G10450 67.2 1.6e-87 320.1
Tan02g2393 . 5 236 14-3-3 family AT5G10450 67.2 2.0e-85 313.2
Tan04g1015 . 3 239 14-3-3 family AT5G10450 66.3 4.5e-85 312.0
Tan02g2268 . 3 239 14-3-3 family AT5G10450 65.4 3.2e-83 305.8
Tan02g2269 . 3 239 14-3-3 family AT5G10450 65.4 3.2e-83 305.8
Tan01g3788 . 5 236 14-3-3 family AT5G10450 66.8 5.5e-83 305.1
Tan02g0162 . 14 213 14-3-3 family AT5G10450 71.0 1.1e-78 290.8
Tan02g0164 . 14 213 14-3-3 family AT5G10450 71.0 1.1e-78 290.8
Tan04g1848 . 4 260 14-3-3 family AT3G02520 91.1 9.3e-128 453.8
Tan04g1849 . 4 260 14-3-3 family AT3G02520 91.1 9.3e-128 453.8
Tan02g2410 . 6 252 14-3-3 family AT3G02520 86.7 1.9e-117 419.5
Tan01g3801 . 5 258 14-3-3 family AT3G02520 84.0 2.8e-116 415.6
Tan02g2500 . 10 248 14-3-3 family AT3G02520 75.7 1.8e-99 359.8
Tan04g1015 . 8 256 14-3-3 family AT3G02520 68.9 9.7e-93 337.4
Tan02g2268 . 8 257 14-3-3 family AT3G02520 69.0 1.3e-92 337.0
Tan02g2393 . 1 249 14-3-3 family AT3G02520 69.4 1.3e-92 337.0
Tan02g0163 . 4 238 14-3-3 family AT3G02520 72.2 1.4e-91 333.6
Tan02g2269 . 8 244 14-3-3 family AT3G02520 72.0 1.8e-91 333.2
Tan01g3788 . 1 239 14-3-3 family AT3G02520 70.5 4.2e-88 322.0
Tan02g0162 . 1 213 14-3-3 family AT3G02520 72.1 2.4e-83 306.2
Tan02g0164 . 1 213 14-3-3 family AT3G02520 72.1 2.4e-83 306.2
Tan02g2500 . 9 246 14-3-3 family AT5G65430 88.2 8.8e-115 410.6
Tan01g3801 . 1 242 14-3-3 family AT5G65430 79.4 1.2e-103 373.6
Tan02g2410 . 8 242 14-3-3 family AT5G65430 80.1 3.5e-103 372.1
Tan04g1848 . 7 241 14-3-3 family AT5G65430 78.8 4.5e-103 371.7
Tan04g1849 . 7 241 14-3-3 family AT5G65430 78.8 4.5e-103 371.7
Tan02g0163 . 1 238 14-3-3 family AT5G65430 68.9 8.3e-89 324.3
Tan02g2393 . 5 236 14-3-3 family AT5G65430 69.4 7.8e-87 317.8
Tan04g1015 . 8 239 14-3-3 family AT5G65430 69.4 1.7e-86 316.6
Tan02g2268 . 8 239 14-3-3 family AT5G65430 68.5 1.2e-84 310.5
Tan02g2269 . 8 239 14-3-3 family AT5G65430 68.5 1.2e-84 310.5
Tan01g3788 . 5 236 14-3-3 family AT5G65430 68.5 2.8e-84 309.3
Tan02g0162 . 14 213 14-3-3 family AT5G65430 73.0 5.4e-80 295.0
Tan02g0164 . 14 213 14-3-3 family AT5G65430 73.0 5.4e-80 295.0
Tan02g0163 . 1 259 14-3-3 family AT2G42590 80.8 1.7e-116 416.4
Tan02g0162 . 1 234 14-3-3 family AT2G42590 82.2 3.6e-106 382.1
Tan02g0164 . 1 234 14-3-3 family AT2G42590 82.2 3.6e-106 382.1
Tan01g3788 . 3 240 14-3-3 family AT2G42590 78.6 3.3e-104 375.6
Tan02g2393 . 3 242 14-3-3 family AT2G42590 78.3 4.4e-104 375.2
Tan04g1015 . 6 257 14-3-3 family AT2G42590 75.5 4.4e-104 375.2
Tan02g2268 . 6 255 14-3-3 family AT2G42590 74.9 1.8e-102 369.8
Tan02g2269 . 6 244 14-3-3 family AT2G42590 77.0 1.6e-101 366.7
Tan04g1848 . 8 248 14-3-3 family AT2G42590 73.0 1.1e-91 334.0
Tan04g1849 . 8 248 14-3-3 family AT2G42590 73.0 1.1e-91 334.0
Tan02g2410 . 8 248 14-3-3 family AT2G42590 70.5 7.2e-91 331.3
Tan01g3801 . 8 245 14-3-3 family AT2G42590 71.0 4.7e-90 328.6
Tan02g2500 . 11 248 14-3-3 family AT2G42590 64.7 4.0e-81 298.9
Tan02g2393 . 1 241 14-3-3 family AT1G22300 80.9 8.0e-105 377.5
Tan02g0163 . 6 242 14-3-3 family AT1G22300 78.1 5.7e-103 371.3
Tan02g2269 . 5 245 14-3-3 family AT1G22300 76.8 8.3e-102 367.5
Tan02g2268 . 5 244 14-3-3 family AT1G22300 76.7 2.4e-101 365.9
Tan04g1015 . 5 244 14-3-3 family AT1G22300 77.1 3.1e-101 365.5
Tan01g3788 . 1 240 14-3-3 family AT1G22300 76.7 1.9e-98 356.3
Tan02g0162 . 1 217 14-3-3 family AT1G22300 78.8 1.5e-95 346.7
Tan02g0164 . 1 217 14-3-3 family AT1G22300 78.8 1.5e-95 346.7
Tan04g1848 . 4 246 14-3-3 family AT1G22300 70.4 6.6e-91 331.3
Tan04g1849 . 4 246 14-3-3 family AT1G22300 70.4 6.6e-91 331.3
Tan02g2410 . 8 246 14-3-3 family AT1G22300 69.9 1.8e-88 323.2
Tan01g3801 . 8 245 14-3-3 family AT1G22300 68.9 2.0e-87 319.7
Tan02g2500 . 11 248 14-3-3 family AT1G22300 64.7 1.5e-79 293.5
Tan02g0163 . 11 246 14-3-3 family AT1G34760 81.4 6.1e-105 377.9
Tan02g2393 . 1 245 14-3-3 family AT1G34760 80.0 1.4e-104 376.7
Tan02g2268 . 5 247 14-3-3 family AT1G34760 79.8 4.0e-104 375.2
Tan04g1015 . 5 247 14-3-3 family AT1G34760 79.8 6.8e-104 374.4
Tan02g2269 . 5 243 14-3-3 family AT1G34760 80.3 1.2e-103 373.6
Tan01g3788 . 1 243 14-3-3 family AT1G34760 77.8 1.0e-99 360.5
Tan02g0162 . 1 221 14-3-3 family AT1G34760 81.0 7.3e-98 354.4
Tan02g0164 . 1 221 14-3-3 family AT1G34760 81.0 7.3e-98 354.4
Tan04g1848 . 4 250 14-3-3 family AT1G34760 70.4 4.7e-89 325.1
Tan04g1849 . 4 250 14-3-3 family AT1G34760 70.4 4.7e-89 325.1
Tan02g2410 . 8 245 14-3-3 family AT1G34760 71.4 1.1e-88 323.9
Tan01g3801 . 8 249 14-3-3 family AT1G34760 69.4 5.2e-88 321.6
Tan02g2500 . 11 247 14-3-3 family AT1G34760 64.1 2.2e-78 289.7
Tan02g2268 . 2 254 14-3-3 family AT1G26480 85.4 2.6e-117 419.1
Tan04g1015 . 2 254 14-3-3 family AT1G26480 85.4 1.7e-116 416.4
Tan02g2269 . 2 244 14-3-3 family AT1G26480 86.8 4.5e-114 408.3
Tan02g0163 . 3 242 14-3-3 family AT1G26480 80.4 1.1e-107 387.1
Tan02g2393 . 2 249 14-3-3 family AT1G26480 76.6 2.5e-104 375.9
Tan01g3788 . 3 244 14-3-3 family AT1G26480 76.0 8.3e-100 360.9
Tan02g0162 . 1 217 14-3-3 family AT1G26480 80.6 1.3e-97 353.6
Tan02g0164 . 1 217 14-3-3 family AT1G26480 80.6 1.3e-97 353.6
Tan02g2410 . 8 260 14-3-3 family AT1G26480 72.0 5.7e-93 338.2
Tan01g3801 . 8 256 14-3-3 family AT1G26480 71.3 8.3e-92 334.3
Tan04g1848 . 5 256 14-3-3 family AT1G26480 72.0 5.4e-91 331.6
Tan04g1849 . 5 256 14-3-3 family AT1G26480 72.0 5.4e-91 331.6
Tan02g2500 . 11 244 14-3-3 family AT1G26480 66.2 1.5e-80 297.0
Tan04g1015 . 5 237 14-3-3 family AT1G78220 51.7 1.9e-63 240.0
Tan02g0163 . 6 236 14-3-3 family AT1G78220 50.9 3.3e-63 239.2
Tan02g2393 . 1 234 14-3-3 family AT1G78220 51.1 7.4e-63 238.0
Tan02g2268 . 5 237 14-3-3 family AT1G78220 50.9 2.8e-62 236.1
Tan02g2269 . 5 237 14-3-3 family AT1G78220 50.9 2.8e-62 236.1
Tan01g3788 . 1 234 14-3-3 family AT1G78220 50.2 1.2e-60 230.7
Tan02g0162 . 1 211 14-3-3 family AT1G78220 50.5 5.1e-56 215.3
Tan02g0164 . 1 211 14-3-3 family AT1G78220 50.5 5.1e-56 215.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000486 6 4 5 6 5 2 5 3 3 3 3 3 6 3 2 6 3 6 6 3 3 3 3 3 3 3 3 6 4 0 114