Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2410 ATGGCTGCCGCTCCTTCTGTTCGTGAGGAGAATGTTTACATGGCCAAGCTGGCCGAGCAGGCCGAGCGTTACGAGGAGATGGTTGAGTTCATGGAGAAGGTTTCCGCTTCCATCGACAAGGAGGAGCTCACCGTTGAGGAGAGAAACCTCCTCTCCGTTGCCTACAAGAACGTTATCGGCGCTCGCAGGGCCTCCTGGCGTATCATTTCCTCCATTGAGCAGAAGGAGGAGAGCCGTGGCAACGATGACCATGTCTCTGTGATCCGTGACTATAGATCCAAAATTGAGAGTGAGCTCTCCAATATCTGCGATGGAATCCTCAAACTCCTCGATTCCAGACTCATTCCATCCGCCGCCTCCGGAGATTCCAAGGTCTTTTACCTCAAAATGAAGGGCGATTACCATAGATATCTCGCCGAATTCAAAACCGGTGCCGAAAGGAAGGAAGCCGCCGAAAGTACCCTCACTGCTTACAAAGCCGCTCAGGATATTGCAAATGCTGAGCTACCTCCTACACATCCGATCCGACTTGGATTGGCTCTTAACTTCTCTGTATTCTACTATGAAATTTTGAATTCCCCTGATCGTGCCTGCAGTCTTGCGAAACAGGCGTTTGATGAAGCTATCGCTGAATTGGATACCCTCGGCGAGGAATCCTACAAAGATAGTACTTTGATTATGCAACTTCTTCGCGATAACCTCACTCTCTGGACCTCGGACATGCAGGATGACGGTGCCGATGAGATTAAAGAAGCTCCCCCAAAGCGTGAGGATGAAAAGCAGTGA 786 50.25 MAAAPSVREENVYMAKLAEQAERYEEMVEFMEKVSASIDKEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRDYRSKIESELSNICDGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPPKREDEKQ 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 92708655 92711062 + Tan0011989.1 Tan02g2410 745036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2410 261 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Tan02g2410 261 MobiDBLite consensus disorder prediction 243 261 - -
Tan02g2410 261 Coils Coil 14 34 - -
Tan02g2410 261 SMART 1433_4 8 251 IPR023410 -
Tan02g2410 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Tan02g2410 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Tan02g2410 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Tan02g2410 261 MobiDBLite consensus disorder prediction 242 261 - -
Tan02g2410 261 SUPERFAMILY 14-3-3 protein 8 240 IPR036815 -
Tan02g2410 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Tan02g2410 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Tan02g2410 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Tan02g2410 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Tan02g2410 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Tan02g2410 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Tan02g2410 261 Gene3D - 2 251 IPR036815 -
Tan02g2410 261 PIRSF 14-3-3 2 250 IPR000308 -
Tan02g2410 261 FunFam 14-3-3 protein epsilon 4 251 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2410 Tan-Chr2:92708655 Tan04g1848 Tan-Chr4:57508121 1.70E-118 dispersed
Tan01g3801 Tan-Chr1:102912002 Tan02g2410 Tan-Chr2:92708655 1.60E-129 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2410 K06630 - csv:101220164 506.523