Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2485 ATGAAAGGCGATTTCGCTCACCCCAAGAACAAAACTTCCAATATGTTATCCAAATTCCATCTCGCCCACCCGTTTACCCATCCTCCGCCTCAACAACCCGACGATGATTCCGCCGCCGCCGCCGTACCTCCGCCGTTTAAACACTTCTCCGACCCTAGCTCCGTCGCCACCGATGGCTCTACCATCGAGGTGGTACGGCGGCCGAGGGGTCGACCGCCAGGATCCAAGAATAAACCGAAACCGGCTCTTGTCATTACCCGGGAACCCGAACCGACTATGCGGCCGTACGTTCTTGAAGTGCCGGGTGGAAACGACGTCGTTGAAGCTATTTCGCGGTTCTGTCGTCGGAAGAATTTGGGTCTTTGTGTTCTTAACGGCTCTGGGACTGTTGCTAATGTTTCTCTCCGGCAACCCTCCGCCACCCCCGGCGCCACCGTCACCTTCCACGGCCGGTTTGAGATCCTCTCCATTTCCGCTACCGTGTTTCCTCAAACGACGCCGTTGCCTCTTCCCAATGGCTTCACTATCTCTCTCGCCGGACCTCAGGGACAAATCGTCGGCGGCCTGGTCTCCGGCGCCTTGATTGCCGCCGGTACTGTTTTCGTCGTCGCCTCGTCGTTCAATAATCCCTTGTACCACCGACTCCCCGATGACGATGAGATTCAGAATTTGGGATCCGGCGGCAGCGGCGAGGTTCATTCCCCACATGTCTCCGGCGGCGGAGATAGTAGCGGGCACGGGCACGGACACGGGCACGGGCAGCCACTTGTGGAATCGTGTGGAGTGGCTATGTACAGTAGCCACGCGCCGTCCGACGTATTATGGGCGCCGACGGCGAGGCAACCGCCACCGCCGCCGTACTAA 864 59.03 MKGDFAHPKNKTSNMLSKFHLAHPFTHPPPQQPDDDSAAAAVPPPFKHFSDPSSVATDGSTIEVVRRPRGRPPGSKNKPKPALVITREPEPTMRPYVLEVPGGNDVVEAISRFCRRKNLGLCVLNGSGTVANVSLRQPSATPGATVTFHGRFEILSISATVFPQTTPLPLPNGFTISLAGPQGQIVGGLVSGALIAAGTVFVVASSFNNPLYHRLPDDDEIQNLGSGGSGEVHSPHVSGGGDSSGHGHGHGHGQPLVESCGVAMYSSHAPSDVLWAPTARQPPPPPY 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 93448395 93449851 + Tan0012890.1 Tan02g2485 745111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2485 287 Gene3D - 93 225 - -
Tan02g2485 287 SUPERFAMILY AF0104/ALDC/Ptd012-like 92 219 - -
Tan02g2485 287 MobiDBLite consensus disorder prediction 1 82 - -
Tan02g2485 287 FunFam AT-hook motif nuclear-localized protein 94 226 - -
Tan02g2485 287 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 56 247 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Tan02g2485 287 MobiDBLite consensus disorder prediction 218 256 - -
Tan02g2485 287 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 208 IPR005175 -
Tan02g2485 287 CDD DUF296 94 207 IPR005175 -
Tan02g2485 287 ProSiteProfiles PPC domain profile profile. 90 228 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2485 Tan-Chr2:93448395 Tan06g2213 Tan-Chr6:72524571 1.80E-44 dispersed
Tan01g3849 Tan-Chr1:103244139 Tan02g2485 Tan-Chr2:93448395 7.90E-80 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2485 - - - 0.0