Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2500 ATGGCCGCCAACGTGCCGGACAATCTCTCTCGCGAGCAATATGTGTACCTAGCGAAGCTTGCCGAGCAGGCTGAAAGATATGAGGAGATGGTTCAGTTCATGCAGAAACTTGTTCTTGGTTCAACTCCTGGCTCCGAGCTCTCTGTCGAGGAGCGAAATCTTCTCTCTGTTGCTTACAAGAACGTGATTGGCTCACTTCGAGCCGCTTGGCGTATTGTCTCTTCCATCGAGCAGAAGGAGGAGAGTCGTAAGAATGAAGAGCATGTTGTTCTTGTTAAGGATTATAGATCAAAGGTTGAGTCTGAGCTTTCCGAGGTCTGTGCGAGTATTTTGCAGCTTTTGGACTCGAATCTTATTCCTTCGGCTTCTGCTAGTGAGTCTAAGGTCTTCTACTTGAAGATGAAGGGGGATTACCATAGGTATTTGGCGGAGTTTAAGGTTGGGGATGAGAGGAAAGCTGCTGCTGAGGATACTATGCTGGCTTATAGGGCTGCTCAGGATGTCGCAGGTGCGGATCTTGCACCCACTCATCCGATAAGGCTGGGGCTGGCACTCAATTTCTCTGTGTTTTACTTCGAGATTCTGAATCAATCTGATAAAGCATGTAGCATGGCCAAAGAGGCATTTGAGGAAGCCATTGCTGAGCTGGACACCTTGGGTGAAGAATCATACAAGGACAGTACCCTTATCATGCAGCTGTTGAGGGACAACCTCACTCTCTGGACTTCAGATGCGCAGGACCAGTTAGATGAGTCATAG 759 48.35 MAANVPDNLSREQYVYLAKLAEQAERYEEMVQFMQKLVLGSTPGSELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVVLVKDYRSKVESELSEVCASILQLLDSNLIPSASASESKVFYLKMKGDYHRYLAEFKVGDERKAAAEDTMLAYRAAQDVAGADLAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKEAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQDQLDES 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 93571825 93575512 + Tan0008798.1 Tan02g2500 745126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2500 252 PRINTS 14-3-3 protein zeta signature 126 148 IPR000308 -
Tan02g2500 252 PRINTS 14-3-3 protein zeta signature 161 187 IPR000308 -
Tan02g2500 252 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Tan02g2500 252 PRINTS 14-3-3 protein zeta signature 188 214 IPR000308 -
Tan02g2500 252 PRINTS 14-3-3 protein zeta signature 215 244 IPR000308 -
Tan02g2500 252 PRINTS 14-3-3 protein zeta signature 95 119 IPR000308 -
Tan02g2500 252 Pfam 14-3-3 protein 17 242 IPR023410 -
Tan02g2500 252 ProSitePatterns 14-3-3 proteins signature 2. 224 243 IPR023409 -
Tan02g2500 252 PIRSF 14-3-3 7 252 IPR000308 -
Tan02g2500 252 SMART 1433_4 11 251 IPR023410 -
Tan02g2500 252 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Tan02g2500 252 FunFam 14-3-3 protein epsilon 8 252 - -
Tan02g2500 252 PANTHER 14-3-3 PROTEIN 11 247 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Tan02g2500 252 Coils Coil 17 37 - -
Tan02g2500 252 Gene3D - 1 252 IPR036815 -
Tan02g2500 252 SUPERFAMILY 14-3-3 protein 10 244 IPR036815 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2500 Tan-Chr2:93571825 Tan04g1848 Tan-Chr4:57508121 3.80E-99 dispersed
Tan02g2500 Tan-Chr2:93571825 Tan01g3801 Tan-Chr1:102912002 1.00E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2500 K06630 - csv:101222827 476.863