Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2506 ATGGTGGTTAGAAAAGTCGGCAAATACGAGGTCGGGAGGACGATTGGTGAAGGTACTTTTGCAAAGGTAAAGTTCGCTCAGAACACTGAGACTGGCGAGAGTGTTGCTATGAAAGTCCTCGATCGGAGCACCATAATCAAGCACAAGATGGTCGAGCAGATAAAGAAGGAGATTTCTATCATGAAGCTTGTGAGGCATCCTTATGTTGTTCGTCTTCACGAGGTTCTTGCAAGCCGTACTAAGATTTATATAATCTTGGAGTACATTACTGGTGGTGAATTGTTCGACAAAATAGTTCATCATGGACGCCTTAGTGAAGCTGAATCTAGGAAATACTTCCAACAGCTAATTGATGGTGTAGATTATTGCCACAGCAAGGGAGTATATCACAGAGATTTAAAGCCTGAAAATCTGCTACTCGACTCCCTAGGTAATTTAAAGATCTCAGACTTTGGCCTGAGTGCATTGCCCGAACAAGGAGTTAGCCTCCTCCGCACAACATGTGGGACTCCAAACTATGTAGCACCAGAGGTGCTCAATCACAAGGGTTATGATGGTACTATGGCAGATGTTTGGTCCTGTGGGGTAATCCTTTATGTGTTGATGGCAGGGTATCTTCCATTTGATGAGCTTGATCTCACCACGTTATATAGTAAGATTGAGAGAGCCGACTTTTCATGTCCATCTTGGTTCCCTGTGGGGGCAAAAGCCTTGATCCATAGAATATTTGACCCCAATCCTTCAACTCGTATTACCATTGAACAGATCAGAGAGGATGAGTGGTTCAAGAAAAATTATTTTTCTGTCAAACTTTTCGAAGATGAAGATGTAAATCTGGATGATGTGAATGCTGTCTTTGATGATCCTGAGGAACAAAGGACCGAAGAAGAACGTGGTAATGAGGACATGAGCCCTCTGGCACTTAATGCATTTGATTTAATAATTCTATCTCAAGGCTTAAACCTGGGAACGATGTTTGACCGTGGCCAGGATTCTGTGAAGTACCCGACACGCTTTGTCTGCCAAAAGCCTGCGAAGGTTTTATTATCAACTATGGAAGTTGTAGCTCAATCAATGGGTTTCAAGACACACATTCGCAATTACAAGATGAGAGTAGAAGGTCCATCAGCAAGCAAGACTTCTTATTTCTCAGTCATTATGGAAATTTTCGATGTCGCTCCCACGTTCTTTATGGTGGACATTCAGAAAGCAGCTGGGGAAACCAGCGAATATCTCAAGTTCTACAAGAGCTTTTACAGCAATCTTGAAGACATCATCTGGAAACCTTCAATTGACAGCAGCAAATCAAGGACCACCAAGAACAAGAGTAAAAAACGCTGA 1341 42.58 MVVRKVGKYEVGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVEQIKKEISIMKLVRHPYVVRLHEVLASRTKIYIILEYITGGELFDKIVHHGRLSEAESRKYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSLGNLKISDFGLSALPEQGVSLLRTTCGTPNYVAPEVLNHKGYDGTMADVWSCGVILYVLMAGYLPFDELDLTTLYSKIERADFSCPSWFPVGAKALIHRIFDPNPSTRITIEQIREDEWFKKNYFSVKLFEDEDVNLDDVNAVFDDPEEQRTEEERGNEDMSPLALNAFDLIILSQGLNLGTMFDRGQDSVKYPTRFVCQKPAKVLLSTMEVVAQSMGFKTHIRNYKMRVEGPSASKTSYFSVIMEIFDVAPTFFMVDIQKAAGETSEYLKFYKSFYSNLEDIIWKPSIDSSKSRTTKNKSKKR 446
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 93633492 93638295 - Tan0004949.1 Tan02g2506 745132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2506 446 SMART serkin_6 9 262 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g2506 446 Pfam NAF domain 305 363 IPR004041 GO:0007165(InterPro)
Tan02g2506 446 Gene3D Transferase(Phosphotransferase) domain 1 3 306 - -
Tan02g2506 446 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165(InterPro)
Tan02g2506 446 Gene3D Kinase associated domain 1, KA1 307 428 - -
Tan02g2506 446 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524(InterPro)
Tan02g2506 446 CDD CIPK_C 309 424 - -
Tan02g2506 446 FunFam Non-specific serine/threonine protein kinase 303 427 - -
Tan02g2506 446 Pfam Protein kinase domain 9 262 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g2506 446 SUPERFAMILY Protein kinase-like (PK-like) 6 294 IPR011009 -
Tan02g2506 446 FunFam Non-specific serine/threonine protein kinase 1 88 - -
Tan02g2506 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g2506 446 ProSiteProfiles Protein kinase domain profile. 9 262 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g2506 446 FunFam Non-specific serine/threonine protein kinase 2 303 - -
Tan02g2506 446 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 412 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2506 Tan-Chr2:93633492 Tan09g1415 Tan-Chr9:66275846 1.40E-168 dispersed
Tan02g2506 Tan-Chr2:93633492 Tan05g2668 Tan-Chr5:78077264 1.10E-149 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67250 PF00069 Pkinase 1.20E-71 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2506 - - - 0.0