Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2516 ATGGTGATGCCCGAGTCGTCTGAGGGCCACCGGGCCGCGTCTCGTCGAGCGAATCGACCGGCGACTCGGCCGCTAGTCGGAGCTAGGGTTCCGCTAAAACGGTTACTCCGCGTGGCATCTGTCGCATGTGGAATTCAATTCGGTTGGGCTTTGCAGCTCTCTCTTCTTACTCCTTATATTCAAGAGCTCGGTATTCCTCATGCTTGGTCCAGTCTCATATGGCTCTGCGGACCGCTTTCCGGCCTCTTTGTCCAGCCGCTCGTTGGCCACATGAGCGATCGCTGCACCAGCCGATACGGCCGCCGGAGGCCGTTTATTGTCGCTGGAGCGCTTTCCATAGTACTTGCCGTTCTGATTATCGGTCACTCGGCGGACCTCGGTTGGTTGATTGGTGACAGAGGTGATGTCAGGCCTCGTGCGATTGGATTCTTTGTGTTTGGATTTTGGATTCTGGACGTCGCTAACAACTTCTCACAGGGTCCTTGTAGAGCTCTGCTTGCTGATCTTACCGGTAAGGATCATCGAAGGAATCGGGTGGCAAATGCTTATTTTTCTCTATTTATCGCTATTGGTAATGTTTTTGGATATGCAACTGGATCTTTTAGTGGCTGGTACAAGATCTTGCCATTTACTCTTACCTCTGCATGTTCCGTTAATTGTGCAAATCTCAAGTCAGCTTTCTTGATTGATGTCGTGTTCATTGCAATTACAACATATTTGAGTGTATCAGCAGCTCAAGAGTTACCTCTAGATTCAAGCGACAGGTCTTCCCTCCTTGTGGAAGAAGGTATGGGGCAGTCAAGTCAAGCTTCAGAAGCATTTCTCTGGGAGTTGTTTCGGACTTTTAGACACTTCTCCGGGTATATATGGGTAATTTTGCTTGTCACTTCCCTGACATGGGTAGCATGGTTTCCATTTATTCTATTTGATACTGATTGGATGGGTAGAGAGATTTATGGTGGCAAGCCAAATGAAGGACAGAGTTATAGTTCCGGAGTCAGAATGGGAGCCTTTGGTCTGATGTTTAACTCTGTTGTCCTTGGAATAACTTCATTACTTATGGAGAAGCTGTGCAGAAAGTGGGGTGCTGGATTTGTATGGGGAATCTCTAATATTTTTATGGCTCTATGTTTCCTTGCTATCCTGGTTATTACGTATGTGGCAAACAATATGGGTTATACAGGTCATGATCTCCCACCAAATAGTATTGTATCAGCTGCATTGATTATCTTTGCTCTTCTTGGCGCCCCTTTGGCAATTACTTACAGTGTTCCATATGCCATGATCTCATCGCGTGTTGAATCTTTACAACTTGGTCAAGGTTTGTCTGTGGGTGTCTTGAACTTGGCAATAGTAATCCCACAGGTTGTGGTGTCCCTGGGAAGTGGACCATGGGATCAGCTGTTTGGTGGTGGAAACTCTCCAGCTTTTGCTGTGGCAGCACTTGCAGCCTTTGCAAGTGGACTCATTGCCATCTTGGCTCTTCCTCGGTCTAGTGCTCAGAAGCCCAGAACCCTCACATGA 1524 47.51 MVMPESSEGHRAASRRANRPATRPLVGARVPLKRLLRVASVACGIQFGWALQLSLLTPYIQELGIPHAWSSLIWLCGPLSGLFVQPLVGHMSDRCTSRYGRRRPFIVAGALSIVLAVLIIGHSADLGWLIGDRGDVRPRAIGFFVFGFWILDVANNFSQGPCRALLADLTGKDHRRNRVANAYFSLFIAIGNVFGYATGSFSGWYKILPFTLTSACSVNCANLKSAFLIDVVFIAITTYLSVSAAQELPLDSSDRSSLLVEEGMGQSSQASEAFLWELFRTFRHFSGYIWVILLVTSLTWVAWFPFILFDTDWMGREIYGGKPNEGQSYSSGVRMGAFGLMFNSVVLGITSLLMEKLCRKWGAGFVWGISNIFMALCFLAILVITYVANNMGYTGHDLPPNSIVSAALIIFALLGAPLAITYSVPYAMISSRVESLQLGQGLSVGVLNLAIVIPQVVVSLGSGPWDQLFGGGNSPAFAVAALAAFASGLIAILALPRSSAQKPRTLT 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 93776094 93781350 - Tan0006166.1 Tan02g2516 745142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2516 507 Pfam MFS/sugar transport protein 47 181 - -
Tan02g2516 507 NCBIfam sucrose/proton symporter 30 499 IPR005989 GO:0005886(InterPro)|GO:0008515(InterPro)|GO:0015770(InterPro)
Tan02g2516 507 PANTHER SUGAR TRANSPORTER 29 493 - GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0008506(PANTHER)|GO:0016020(PANTHER)
Tan02g2516 507 FunFam Sucrose transport protein 29 495 - -
Tan02g2516 507 Gene3D MFS general substrate transporter like domains 32 495 IPR036259 -
Tan02g2516 507 CDD MFS_SLC45_SUC 35 493 - -
Tan02g2516 507 SUPERFAMILY MFS general substrate transporter 35 498 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2896 Tan-Chr1:63089181 Tan02g2516 Tan-Chr2:93776094 1.20E-85 dispersed
Tan02g1470 Tan-Chr2:59008354 Tan02g2516 Tan-Chr2:93776094 9.80E-131 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2516 K15378 - csv:101220384 899.042