Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2519 ATGGCTTTTCACTCAGCTTTCTTTCTTCTTTTGTTCTTCACTTCCTCCATCTCTTCTTCTTCTCAAACTTTTACTACTGCTACTACTGCTACTCCCAATCAGTCTCAGTTCTTCTTTCTCATGCAAAAGACTGCCTCAGGAAAGTTCCTCTCTGATTGGGATCTTTCAGGAGGTAAATCCTTCTGCAACTTCACGGGAATCGAGTGCAATGACCGAGGTCGAGTCATTGGGATTGATATCTCTCGCCAGTCTCTCTCCGGTGGCTTCCCTGAAGATGTGTGCTCTTACTTTCCAGAGCTGCGAGTTCTTCGTCTTGCTGGTACTGGCTTTCGGGGACGTTTTCCTTCTGGAGTCACTAGCTGTTCTCTCCTTGAAGAGCTTGACATGAGCTCTTTGTACCTCAATGGAACAATCCCGGATTTGTCGCAAATGAAAAACCTGCGTGTGCTCGACTTATCGTACAATTCCTTCACCGGTGACTTTCCCATGTCGGTTTTCGACCTTGTGAATCTTGAGGTGCTGAATTTCAATGAGAATTACAACCTCAACTTATGGAAGTTGCCTGAGAAGATCTTCAGCTTGAAGAAGCTGAAATCCATGGTGTTGACAACCTGTATGTTAGACGGGGAAATCCCGCGATCGATAGGGAACATGACGTCTCTCGTTGATCTTGAACTCAGTGGGAACTTTCTCAAGGGAGAGATTCCAAAAGAAATCTCCTTGCTGAAGAACTTGCAACAGCTAGAACTCTATTACAATGAACTCACAGGGAACATACCAGAGGAGCTTGGGAATCTAACAGAGCTTGTGGACATGGACATGTCAGTGAACCTTTTGACAGGAGAGCTTCCAGAATCCCTTTGCAAACTCCCAAAGCTTAAAGTTTTACAGATTTACAACAATAGCCTCACAGGAGAAATCCCAAGTGTGTTAGCCAACTCAACAACACTCACTATGCTATCACTTTATGACAATTTTCTTACAGGACAGATCCCACAAAAGTTGGGGAAGTTCTCACCAATGGTTGTCCTCGACTTGTCGGAAAATCGCTTGTCGGGGCCATTGCCATTGGATATATGCAGAGGGGGCAAATTGCTGTACTTTCTTGTCCTGCAAAACAGCCTTTCTGGAGAAATCCCAGCAAGTTATGCTGAATGTGAGTCACTTTTAAGGTTTAGGATTAGTTTCAATCAGTTGGTGGGCACAATTCCTCGAGGAGTTTTGGCTCTCCCCCATGTTTCGATCATTGATGTTGCTCATAATCATCTCACTGGTTCCATTTCAAACTCAATCTCACAGGCAAGAAACTTATCAGAGTTGTTCTTGCAAAGAAACAGGATTTCTGGAGTTATCCCGCCGGAGATTTCAGGAGCAACCAATCTGGTGAAGCTTGATCTCAGCAACAATCTTCTCTCCGGTCCGGTGCCGTTCGAGGTTGGTAATCTGAAGAAACTTAACCTGGTGATGTTACAAGGAAACCAACTGGATTCATCAATCCCCAGTTCATTCACTTCGTTGAAATCCCTCAACGTTCTTGATCTCTCAAACAATCATTTATCCGGGAAAATCCCAGAAAGTTTGAGTGAATTGTTCCCAAGTTCTTTGAATTTTTCAAACAATCAACTCTCGGGTCCAATTCCTGTGTCTTTGATCAAACAAGGGTTGGCCGATAGCTTTTCCGGCAACCCAAATCTATGTATTCCACCGGCATATTTCATTTCACCGGATCAGAAATTCCCAATTTGCTCACATTTTTCCTTCACAAAACGTCTAAATTTCATCTGGGCAATCGGAATTCCATTGCTCATCTTCATCACCGCCGCCGTCCTGTTTCTAAAACGCAGAATCACAACAAAAAAGACATCAGACATCGAGAACAAAGAAACCCTCTCTTCGTCATTCTTCCATTTGCAGAGCTTCGACCAAAACTCTATTCTCGAAGCCATGGTGGAAAAGAACATCGTCGGCCACGGCGGGTCGGGAACGGTCTACAAAATCGAGCTCGGAAAAGGAGAAACCGTCGCCGTGAAGAGGCTGTGGAATCGAAGAGCGAAACATCTCTTCGACAAGGAATTGAAAACAGAGGTCGAAACCCTAGGAACCGTAAGGCACAAGAACATCGTGAAACTCTACAGCTACTTTTCAGGTCTAAATTGCAGCCTTCTGGTTTACGAATACATGCCAAACGGAAACCTATGGGACGCGCTTCATAAAGGGTGGATTCATCTCGATTGGCCTACGCGCCACCGCATCGCGGTGGGAATCGCCCAAGGCCTCGCCTATCTCCACCACGACCTCTCGCCGCCGGTAATCCACAGAGACATCAAAACCACAAACATTCTACTAGACGCAAGTTACCAACCCAAAGTTGCAGATTTCGGCATAGCCAAAGTTCTACAAGGAGGCAAAGATTCAACCGACTCTGTAATCGCAGGAACTTACGGCTATTTGGCCCCCGATTATGCATATTCATCGAAGGCAACAACCAAATGCGATGTGTACAGTTTTGGGGTGGTGTTAATGGAGCTGATTACAGGGAAGAAGCCGATTGAAGCAGAATATGGAGAGAATAAGAACATTGTGTTCTGGGTTTCGAACAAAGTGGACACAAAAGAAGGGGTTCTTGAGATTCTTGACAAAAGATTAAAAGGGTTGTTCAGAGATGAGATAATTAAGGCACTGAGGATCGCAATTCGCTGTACTTACAAGAATCCAGTGCTTCGACCCACCATGGGAGAGGTGGTTCAGCTTCTGCAAGAGGTTGATCCTTGTAAATTTGATCGGCCTTTCGAAGATGTCAAAAAAGAAGAAGATACGTATGATGTCACTAAAATAAAGTAG 2841 44.74 MAFHSAFFLLLFFTSSISSSSQTFTTATTATPNQSQFFFLMQKTASGKFLSDWDLSGGKSFCNFTGIECNDRGRVIGIDISRQSLSGGFPEDVCSYFPELRVLRLAGTGFRGRFPSGVTSCSLLEELDMSSLYLNGTIPDLSQMKNLRVLDLSYNSFTGDFPMSVFDLVNLEVLNFNENYNLNLWKLPEKIFSLKKLKSMVLTTCMLDGEIPRSIGNMTSLVDLELSGNFLKGEIPKEISLLKNLQQLELYYNELTGNIPEELGNLTELVDMDMSVNLLTGELPESLCKLPKLKVLQIYNNSLTGEIPSVLANSTTLTMLSLYDNFLTGQIPQKLGKFSPMVVLDLSENRLSGPLPLDICRGGKLLYFLVLQNSLSGEIPASYAECESLLRFRISFNQLVGTIPRGVLALPHVSIIDVAHNHLTGSISNSISQARNLSELFLQRNRISGVIPPEISGATNLVKLDLSNNLLSGPVPFEVGNLKKLNLVMLQGNQLDSSIPSSFTSLKSLNVLDLSNNHLSGKIPESLSELFPSSLNFSNNQLSGPIPVSLIKQGLADSFSGNPNLCIPPAYFISPDQKFPICSHFSFTKRLNFIWAIGIPLLIFITAAVLFLKRRITTKKTSDIENKETLSSSFFHLQSFDQNSILEAMVEKNIVGHGGSGTVYKIELGKGETVAVKRLWNRRAKHLFDKELKTEVETLGTVRHKNIVKLYSYFSGLNCSLLVYEYMPNGNLWDALHKGWIHLDWPTRHRIAVGIAQGLAYLHHDLSPPVIHRDIKTTNILLDASYQPKVADFGIAKVLQGGKDSTDSVIAGTYGYLAPDYAYSSKATTKCDVYSFGVVLMELITGKKPIEAEYGENKNIVFWVSNKVDTKEGVLEILDKRLKGLFRDEIIKALRIAIRCTYKNPVLRPTMGEVVQLLQEVDPCKFDRPFEDVKKEEDTYDVTKIK 946
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 93824280 93827599 + Tan0000640.1 Tan02g2519 745145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2519 946 Gene3D Ribonuclease Inhibitor 292 576 IPR032675 -
Tan02g2519 946 ProSiteProfiles Leucine-rich repeat profile. 508 530 IPR001611 GO:0005515(InterPro)
Tan02g2519 946 SUPERFAMILY Protein kinase-like (PK-like) 629 918 IPR011009 -
Tan02g2519 946 FunFam Receptor protein-tyrosine kinase CEPR1 290 576 - -
Tan02g2519 946 FunFam leucine-rich repeat receptor-like protein kinase TDR 727 928 - -
Tan02g2519 946 SUPERFAMILY L domain-like 259 583 - -
Tan02g2519 946 PRINTS Leucine-rich repeat signature 461 474 - -
Tan02g2519 946 PRINTS Leucine-rich repeat signature 506 519 - -
Tan02g2519 946 ProSitePatterns Serine/Threonine protein kinases active-site signature. 770 782 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g2519 946 Pfam Protein kinase domain 651 916 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g2519 946 ProSitePatterns Protein kinases ATP-binding region signature. 655 677 IPR017441 GO:0005524(InterPro)
Tan02g2519 946 FunFam Leucine-rich repeat receptor-like protein kinase 184 286 - -
Tan02g2519 946 Gene3D Ribonuclease Inhibitor 38 183 IPR032675 -
Tan02g2519 946 Pfam Leucine rich repeat 411 471 IPR001611 GO:0005515(InterPro)
Tan02g2519 946 SMART LRR_typ_2 506 530 IPR003591 -
Tan02g2519 946 SMART LRR_typ_2 482 505 IPR003591 -
Tan02g2519 946 SMART LRR_typ_2 435 458 IPR003591 -
Tan02g2519 946 SMART LRR_typ_2 290 314 IPR003591 -
Tan02g2519 946 SMART LRR_typ_2 168 194 IPR003591 -
Tan02g2519 946 SMART LRR_typ_2 242 266 IPR003591 -
Tan02g2519 946 PANTHER LEUCINE RICH REPEAT KINASE 2 188 920 IPR051420 -
Tan02g2519 946 Gene3D Ribonuclease Inhibitor 184 286 IPR032675 -
Tan02g2519 946 Pfam Leucine Rich Repeat 146 165 IPR001611 GO:0005515(InterPro)
Tan02g2519 946 Pfam Leucine Rich Repeat 508 530 IPR001611 GO:0005515(InterPro)
Tan02g2519 946 Pfam Leucine Rich Repeat 292 313 IPR001611 GO:0005515(InterPro)
Tan02g2519 946 Pfam Leucine Rich Repeat 244 266 IPR001611 GO:0005515(InterPro)
Tan02g2519 946 ProSiteProfiles Protein kinase domain profile. 649 931 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g2519 946 Gene3D Transferase(Phosphotransferase) domain 1 727 939 - -
Tan02g2519 946 SUPERFAMILY RNI-like 78 353 - -
Tan02g2519 946 SMART serkin_6 649 925 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g2519 946 Gene3D Phosphorylase Kinase; domain 1 620 726 - -
Tan02g2519 946 FunFam receptor protein-tyrosine kinase CEPR1 632 726 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3893 Tan-Chr1:103922963 Tan02g2519 Tan-Chr2:93824280 5.90E-185 dispersed
Tan02g2519 Tan-Chr2:93824280 Tan05g2466 Tan-Chr5:75814122 2.90E-75 dispersed
Tan03g0284 Tan-Chr3:42460360 Tan02g2519 Tan-Chr2:93824280 8.40E-56 transposed
Tan03g2054 Tan-Chr3:75515011 Tan02g2519 Tan-Chr2:93824280 5.30E-47 transposed
Tan11g1064 Tan-Chr11:8334444 Tan02g2519 Tan-Chr2:93824280 1.40E-77 transposed
Tan02g2519 Tan-Chr2:93824280 Tan03g1727 Tan-Chr3:73183948 9.50E-58 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67251 PF00069 Pkinase 1.00E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2519 - - - 0.0