Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2564 ATGGCCAAAATTGCATTGGGATGCGTCGGCGAGGCGACCCAGCCCGACTGCATCCGAGCCCTCGTCGTCGAGTTCATCACCACCTTCCTCTTCGTCTTTGCTGGCGTTGGATCAGCCATAACCGCCAATACACTATTGGCAAACACACTAGTGGGTTTGTTCGCCGTCGCAGTCGCACATGCACTGGTTGTGGCTGTGATGATCTCCACCGGCCACATTTCCGGTGGGCACCTCAACCCTGCCGTCACACTCGGTCTCCTTCTCGGTGGCCACATCACGGTTGTCCGATCTGCTCTATATTGGATCATTCAGTTGCTGGCAGCAACCGCTGCTAGTTTTCTGTTATCGTACCTCACCGGAGGCTTGCCTACTCCAGTTCATACATTAGCAAGTGGAGTTGGCTATCTTCAGGGAGTGATATGGGAGATTATTCTCACCTTTTCCTTGCTGTTCACTGTCTATGGAACAATGGTTGACCCAAAGAAGGGAGCTCTTGATGGGTTGGGTCCAATGTTGACTGGGTTTGTGGTGGGGGCCAACATCTTGGCTGGTGGGGCTTTTTCTGGGGCTTCAATGAACCCAGCCAGATCATTTGGACCAGCTTTGGTGGCTGGAGACTGGACTGACCACTGGGTTTACTGGGTTGGACCTCTTATCGGTGGTGGACTTGCTGGATTCATCTATGAAAATTTCTTCATTGAGAGATCTCATGTCCCTCTACCTAGGGCAGAAGATGGCTACTAG 744 52.28 MAKIALGCVGEATQPDCIRALVVEFITTFLFVFAGVGSAITANTLLANTLVGLFAVAVAHALVVAVMISTGHISGGHLNPAVTLGLLLGGHITVVRSALYWIIQLLAATAASFLLSYLTGGLPTPVHTLASGVGYLQGVIWEIILTFSLLFTVYGTMVDPKKGALDGLGPMLTGFVVGANILAGGAFSGASMNPARSFGPALVAGDWTDHWVYWVGPLIGGGLAGFIYENFFIERSHVPLPRAEDGY 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 94226151 94227683 - Tan0018318.1 Tan02g2564 745190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2564 247 FunFam Probable aquaporin TIP1-1 2 244 - -
Tan02g2564 247 Gene3D Glycerol uptake facilitator protein. 2 243 IPR023271 -
Tan02g2564 247 PRINTS Major intrinsic protein family signature 59 83 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan02g2564 247 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan02g2564 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan02g2564 247 PRINTS Major intrinsic protein family signature 96 115 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan02g2564 247 PRINTS Major intrinsic protein family signature 141 159 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan02g2564 247 PRINTS Major intrinsic protein family signature 211 231 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan02g2564 247 SUPERFAMILY Aquaporin-like 13 241 IPR023271 -
Tan02g2564 247 ProSitePatterns MIP family signature. 77 85 IPR022357 -
Tan02g2564 247 PANTHER AQUAPORIN-8 1 237 IPR034294 GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER)
Tan02g2564 247 Pfam Major intrinsic protein 12 228 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2564 Tan-Chr2:94226151 Tan03g1125 Tan-Chr3:67392328 9.40E-58 dispersed
Tan02g2564 Tan-Chr2:94226151 Tan06g0273 Tan-Chr6:2170720 7.20E-58 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2564 K09873 - csv:101205380 435.261