Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2590 ATGAAGCGCAGCGCCTCCGAATTGGCTCTTGAAGAGCTCCTCGAAAAGACCACCATCGTCTCTCCCGAAGTCATCGACGCCGACGCCGACGCCGACGACGTTTTCAAAATTGAACGCGAACAATTCCTCATCCGAAGCCCTAAAAGAACCAAAAACTTCGCCGATTCCGCCGCCGACGACGCCTGCAGCTTCTTCGGCGATATCGATTTCAATTTCTTCTTCAAAAACAATCGGGGAATAATGGACGCGATTGTTAACTGTGGAGGTGGGCTGGCGGAGGGTCCTTTATGGGCACAGAATCTCACTCCTAAGCTTTCGAGCATTTCAGCCACTATAGATTCTCAGTCTTCTATTGTGAGCAGCCCAACATCAGCCAGCAATTTGATGGGCAGAGAGCACCAAAGAGGCAACAACAGTGGGTCCTCTGAGGATCAATCTGATGATGAGATTGAAGCTGGCTCTTGTGAACAAAGCACTGACCCTCTTGCTTTGAAGAAAATCAGAAGGATGATCTCCAATAGGGACTCTGCTAGAAGATCGAGACGACGAAAACAAGCTCATTTGGCTGAACTCGAGAGTCAGGTGAAACAACTGAAAGTAGAAAATGAAACATTGTTCAACCAGCTTTTAGATGCTAGTCAGCAATACCGTGATGCCAATACAAACAATCGAGTGCTTAAATCAGATGTAGACGCAATGAGAGCCAAGGTAAAGTTGGCTGAAGATACACTTGCTAGAGGCTCAATGACCTGCAGCTTGAACCAGCTGCTGCAGAGTCATTTGAGCACCCCGCAGCCGCTATCGGCGCTGCGGCGGATGTCAAATATCGCATCGCCGCTTGGTCTTCCCGGAGACGACGTTTCTTACTCCGGCGTGACGATGTCGGGCCAGAATCCGGTCACCGGACTCGGAAACTCAGATATGCATATCAAAACTGGAATGGCTAGTGAGGCTGTTAGCTGTGTTTCTGGGATTTGGCCTAGAAATTAG 990 49.19 MKRSASELALEELLEKTTIVSPEVIDADADADDVFKIEREQFLIRSPKRTKNFADSAADDACSFFGDIDFNFFFKNNRGIMDAIVNCGGGLAEGPLWAQNLTPKLSSISATIDSQSSIVSSPTSASNLMGREHQRGNNSGSSEDQSDDEIEAGSCEQSTDPLALKKIRRMISNRDSARRSRRRKQAHLAELESQVKQLKVENETLFNQLLDASQQYRDANTNNRVLKSDVDAMRAKVKLAEDTLARGSMTCSLNQLLQSHLSTPQPLSALRRMSNIASPLGLPGDDVSYSGVTMSGQNPVTGLGNSDMHIKTGMASEAVSCVSGIWPRN 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 94558313 94562895 - Tan0001572.1 Tan02g2590 745216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2590 329 Gene3D - 164 219 - -
Tan02g2590 329 SUPERFAMILY Leucine zipper domain 164 212 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2590 329 FunFam BZIP transcription factor 163 214 - -
Tan02g2590 329 Pfam bZIP transcription factor 163 209 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2590 329 MobiDBLite consensus disorder prediction 112 143 - -
Tan02g2590 329 PANTHER BZIP TRANSCRIPTION FACTOR RISBZ3-RELATED 1 327 IPR044168 GO:0003700(InterPro)
Tan02g2590 329 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 163 226 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2590 329 CDD bZIP_plant_GBF1 183 217 IPR045314 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2590 329 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 168 183 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2590 329 MobiDBLite consensus disorder prediction 112 156 - -
Tan02g2590 329 SMART brlzneu 161 225 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2590 329 Coils Coil 174 215 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2590 Tan-Chr2:94558313 Tan08g0425 Tan-Chr8:4030017 8.70E-27 dispersed
Tan02g2590 Tan-Chr2:94558313 Tan02g2002 Tan-Chr2:89224520 5.90E-07 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26859 PF00170 bZIP_1 1.20E-13 CL0018 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2590 K25784 - csv:101210908 458.373