Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g2590 | ATGAAGCGCAGCGCCTCCGAATTGGCTCTTGAAGAGCTCCTCGAAAAGACCACCATCGTCTCTCCCGAAGTCATCGACGCCGACGCCGACGCCGACGACGTTTTCAAAATTGAACGCGAACAATTCCTCATCCGAAGCCCTAAAAGAACCAAAAACTTCGCCGATTCCGCCGCCGACGACGCCTGCAGCTTCTTCGGCGATATCGATTTCAATTTCTTCTTCAAAAACAATCGGGGAATAATGGACGCGATTGTTAACTGTGGAGGTGGGCTGGCGGAGGGTCCTTTATGGGCACAGAATCTCACTCCTAAGCTTTCGAGCATTTCAGCCACTATAGATTCTCAGTCTTCTATTGTGAGCAGCCCAACATCAGCCAGCAATTTGATGGGCAGAGAGCACCAAAGAGGCAACAACAGTGGGTCCTCTGAGGATCAATCTGATGATGAGATTGAAGCTGGCTCTTGTGAACAAAGCACTGACCCTCTTGCTTTGAAGAAAATCAGAAGGATGATCTCCAATAGGGACTCTGCTAGAAGATCGAGACGACGAAAACAAGCTCATTTGGCTGAACTCGAGAGTCAGGTGAAACAACTGAAAGTAGAAAATGAAACATTGTTCAACCAGCTTTTAGATGCTAGTCAGCAATACCGTGATGCCAATACAAACAATCGAGTGCTTAAATCAGATGTAGACGCAATGAGAGCCAAGGTAAAGTTGGCTGAAGATACACTTGCTAGAGGCTCAATGACCTGCAGCTTGAACCAGCTGCTGCAGAGTCATTTGAGCACCCCGCAGCCGCTATCGGCGCTGCGGCGGATGTCAAATATCGCATCGCCGCTTGGTCTTCCCGGAGACGACGTTTCTTACTCCGGCGTGACGATGTCGGGCCAGAATCCGGTCACCGGACTCGGAAACTCAGATATGCATATCAAAACTGGAATGGCTAGTGAGGCTGTTAGCTGTGTTTCTGGGATTTGGCCTAGAAATTAG | 990 | 49.19 | MKRSASELALEELLEKTTIVSPEVIDADADADDVFKIEREQFLIRSPKRTKNFADSAADDACSFFGDIDFNFFFKNNRGIMDAIVNCGGGLAEGPLWAQNLTPKLSSISATIDSQSSIVSSPTSASNLMGREHQRGNNSGSSEDQSDDEIEAGSCEQSTDPLALKKIRRMISNRDSARRSRRRKQAHLAELESQVKQLKVENETLFNQLLDASQQYRDANTNNRVLKSDVDAMRAKVKLAEDTLARGSMTCSLNQLLQSHLSTPQPLSALRRMSNIASPLGLPGDDVSYSGVTMSGQNPVTGLGNSDMHIKTGMASEAVSCVSGIWPRN | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 94558313 | 94562895 | - | Tan0001572.1 | Tan02g2590 | 745216 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g2590 | 329 | Gene3D | - | 164 | 219 | - | - | |
Tan02g2590 | 329 | SUPERFAMILY | Leucine zipper domain | 164 | 212 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2590 | 329 | FunFam | BZIP transcription factor | 163 | 214 | - | - | |
Tan02g2590 | 329 | Pfam | bZIP transcription factor | 163 | 209 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2590 | 329 | MobiDBLite | consensus disorder prediction | 112 | 143 | - | - | |
Tan02g2590 | 329 | PANTHER | BZIP TRANSCRIPTION FACTOR RISBZ3-RELATED | 1 | 327 | IPR044168 | GO:0003700(InterPro) | |
Tan02g2590 | 329 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 163 | 226 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2590 | 329 | CDD | bZIP_plant_GBF1 | 183 | 217 | IPR045314 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2590 | 329 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 168 | 183 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2590 | 329 | MobiDBLite | consensus disorder prediction | 112 | 156 | - | - | |
Tan02g2590 | 329 | SMART | brlzneu | 161 | 225 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2590 | 329 | Coils | Coil | 174 | 215 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g2590 | Tan-Chr2:94558313 | Tan08g0425 | Tan-Chr8:4030017 | 8.70E-27 | dispersed | |
Tan02g2590 | Tan-Chr2:94558313 | Tan02g2002 | Tan-Chr2:89224520 | 5.90E-07 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26859 | PF00170 | bZIP_1 | 1.20E-13 | CL0018 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g2590 | K25784 | - | csv:101210908 | 458.373 |