Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2612 ATGACGGCACCAGTGTCGGTTGATGGGAAGGGGAAGAGGAATATTGAGAATTTGGTCTCTGCTACTAGGTCGTTGAAGGCTAGTTTAGAGAAATCTAGGGCTTTAGGGTTTGCGTTGCAGAAAGCTGGGTCGAGATTGGAGGAGATTAGCCAAAGGTTGCCGACTTTAGAAGCGGCTGTTCGGCCTATTCGTGCTGATAAGGAAGCTCTCGTCGCCGTCGGTGGTCATATAAATCGGGCTGTTGGGCCGGCGGCGGCGGTGCTTAAGGTTTTTGATGCGGTTCATGGCCTTGAAAAGTCTCTGTTATCGGACCCAAGGAATGATCTGCCTGGTTATTTGTCGGTGTTGAAACGTATGGAAGAGGCATTGAGGTTTTTGGGAGATAACTGTGGACTGGCAATCCAGTGGTTGGAGGATATTGTTGAGTATTTGGAAGATAATACTGTTGCTGATGAGAGATATCTTGCAAATTTGAAGAAATCGTTGAAAAATTTGAGGGATTTGCAGAGTGATGAGGAGAGGACTCGGCTTGATGGGGGGCTTTTGAATGCTGCTTTAGATAAGCTAGAGAATGAGTTTAGGCGTCTTTTAATGGAGCACAGTGTGCCCCTTCCCATGTCTTCTTCCCCGTCACTCGGTGAGCAAGCTTGCATTGCTCCATCTCCGCTGCCTGTGACTGTTATTCAGAAATTGCAGGCCATTCTTGGGAGATTGATTGCTAATAAACGACTTGAGAGATGCATAGCCATTTATGTCGAAGTTCGTAGTTCTAATGTTAGGGCTAGTTTGCAGGCTCTTGATTTGGATTACTTGGAGATATCGGTTTCCGAGTTCAATGATGTGCAGAGCATTGAGGGGTACATTGCAAAATGGGGAAAGCATTTGGAGTTTGCAGTGAAACACTTGTTTGAGGCTGAGTTCAAGCTTTGTAATGATGTTTTTGAGAGGATTGGATTGGATGTTTGGATGGGATGTTTTGCAAAGATAGCAACTCAAGCAGGTATTCTTGCATTTCTTCAATTTGGGAAAACTGTAACAGAGAGCAAGAACGATCCTATTAAGCTATTGAAGTTGTTAGATATATTTGCATCCTTGAACAAACTGAGACTGGACTTTAATAGGCTTTTCGGCGGGGTTGCATGTTTGGAAATTCAAAACCTGACTAGGGATCTCATTAAGAGGGTTATCGATGGTGCGGCCGAGATTTTCTGGGAACTTCTAGTTCAGGTGGAGTTACAGAGGCGAAATTCCCCACCTTTAGATGGGGCGGTTCCAAGGTTGGTTAGCTTCATTATTGATTACAGTAATAAACTGCTTAGTGATGATTATCGGCCGATCTTGACCCAGGCCCTCGTCATTCACCGGAGTTGGAAGAAAGAAAAGTTCCAAGAGGGTCTGCTTATCAGTGAGGTTACGAACCTTGTTAAAGCCATTGAGCAGAATCTGGACACTTGGATAAAGGCTTATGAAGATTCAACCTTGTCAAATTTTTTTCGAACGAAAGTTGGAGAACTAATGGGAGAAAAATTAAAGGAACATGAACAATACAAGGATTACTATGCTGCAGTTTTCTTGAGGGATAGCTGGAGTAAACTTCCTAGCCATTTAAGCCGGGAGGGTTTGATTATGTTCTCAGGTGGGCGAGCTACTGCCCGCGATCTCGTCAAGAAACGTCTAAAGACATTCAATGAAGCTTTTGAAGACATGTATAAGAAGCAATCAAACTGGGTTATGACTGATAAAGAATTGAGGGAGAAAACATGCCAACTAATAGTTCAAACGATCGTGCCTGTATATCGCAGCTACATGCAGAATTATGGCCCCCTCGTCGAGCAAGATGCAAGTTCCAGTAAGTATGCCAAGTACACCGTGCAGAATCTGGAGAAAATGTTACTGTCCCTTTATCAGCCAAAGCCACTTAGGTTCAGCAGCCTTAAAGTTAGGCAAACTAGTGGGAAATTCAGCAATGGTGCAGCAGATCATCGTCGTTCCAACTCCATGGTTATGTAA 2010 44.03 MTAPVSVDGKGKRNIENLVSATRSLKASLEKSRALGFALQKAGSRLEEISQRLPTLEAAVRPIRADKEALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVLKRMEEALRFLGDNCGLAIQWLEDIVEYLEDNTVADERYLANLKKSLKNLRDLQSDEERTRLDGGLLNAALDKLENEFRRLLMEHSVPLPMSSSPSLGEQACIAPSPLPVTVIQKLQAILGRLIANKRLERCIAIYVEVRSSNVRASLQALDLDYLEISVSEFNDVQSIEGYIAKWGKHLEFAVKHLFEAEFKLCNDVFERIGLDVWMGCFAKIATQAGILAFLQFGKTVTESKNDPIKLLKLLDIFASLNKLRLDFNRLFGGVACLEIQNLTRDLIKRVIDGAAEIFWELLVQVELQRRNSPPLDGAVPRLVSFIIDYSNKLLSDDYRPILTQALVIHRSWKKEKFQEGLLISEVTNLVKAIEQNLDTWIKAYEDSTLSNFFRTKVGELMGEKLKEHEQYKDYYAAVFLRDSWSKLPSHLSREGLIMFSGGRATARDLVKKRLKTFNEAFEDMYKKQSNWVMTDKELREKTCQLIVQTIVPVYRSYMQNYGPLVEQDASSSKYAKYTVQNLEKMLLSLYQPKPLRFSSLKVRQTSGKFSNGAADHRRSNSMVM 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 94701618 94703667 + Tan0003637.1 Tan02g2612 745238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2612 669 SUPERFAMILY Cullin repeat-like 87 635 IPR016159 -
Tan02g2612 669 Gene3D Exocyst complex component Exo70 136 641 - -
Tan02g2612 669 Pfam Exo70 exocyst complex subunit C-terminal 290 632 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Tan02g2612 669 Coils Coil 155 175 - -
Tan02g2612 669 PANTHER EXOCYST COMPLEX PROTEIN EXO70 26 636 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Tan02g2612 669 FunFam Exocyst subunit Exo70 family protein 137 641 - -
Tan02g2612 669 Pfam Exocyst complex component Exo70 N-terminal 82 197 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1722 Tan-Chr2:80573758 Tan02g2612 Tan-Chr2:94701618 2.80E-54 dispersed
Tan02g2612 Tan-Chr2:94701618 Tan06g0039 Tan-Chr6:623315 2.20E-157 dispersed
Tan02g2612 Tan-Chr2:94701618 Tan01g2524 Tan-Chr1:34981648 2.90E-21 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2612 K07195 - csv:101207478 1228.0