Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g2666 | ATGGCTGTCAAAACAGCACAATCATTTAGAGATAGGACGCAGGAATTCCAGAACATAACAGAGAGGCTAAAGAAGTCTTTCTCATCTGGCACGGGAACAACGGGACCAAGTGGTGGTTCAAATTCAGAAGAGCAGCACTCTGCTGTGGCTCTGCAGTCTGAATTTAATAAGAGGGCATCCAAGATTGGGCTAGGGATACACCAGACGTCTCAGAAACTCTCGAAGTTGGCAAAATTGGCAAAGAGGACTTCAGTTTTTGATGACCCAACAATGGAAATTCAGGAGCTAACTGCACTTATTAAGCAGGACATTACAACATTGAACTCTGCAGTTGTAGATCTTCAGCTTCACTGCAACTCTAGAAATGAAAGTGGAAATATGTCCAGTGATACTACGAGTCATTCAACCACTGTGGTAGATGATCTTAAGAATCGACTGATGAGCACCACAAAAGAATTTAAAGAAGTCCTAACCATGCGAACAGAAAATTTGAAGGTTCATGAGAACAGAAGACAACTATTTTCTTCTAATGCTACAAAGGAATCTACAAACCCTTTTGTGCGCCAACGCCCATTAGCTTCCAGGTCAGCTGCTGGTGGTGCCTCAAGCGCACCCCCTCCTCCATGGGCCAAGGCGTCTACATCTTTTTCCAAAACATCCCCCGGCAAGCAGGTGGATGGGGAGAGTCAACCATTGTTACAGCAGCAACAGCAACAGATGGTTCCATTACAAGATACTTACATGCAGAGCAGAGCAGAAGCTTTACAAAATGTAGAATCCACCATCCATGAATTGAGCAATATCTTCAACCAACTGGCAACTCTGGTTTCTGAACAAGGAGAGATTGCGATCAGGATCGACGAGAACATGGACGATACACTGGCAAATGTGGAGGGGGCACAGGGAGCTTTGCTCAAGTATCTAAACAGTATATCATCCAATAGGTGGTTGATGATCAAAATTTTCTTTGTACTAATATTCTTCCTTATGGTTTTCTTATTTTTTGTGGCATAG | 1014 | 43.39 | MAVKTAQSFRDRTQEFQNITERLKKSFSSGTGTTGPSGGSNSEEQHSAVALQSEFNKRASKIGLGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTALIKQDITTLNSAVVDLQLHCNSRNESGNMSSDTTSHSTTVVDDLKNRLMSTTKEFKEVLTMRTENLKVHENRRQLFSSNATKESTNPFVRQRPLASRSAAGGASSAPPPPWAKASTSFSKTSPGKQVDGESQPLLQQQQQQMVPLQDTYMQSRAEALQNVESTIHELSNIFNQLATLVSEQGEIAIRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA | 337 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 94990584 | 94997429 | + | Tan0021481.1 | Tan02g2666 | 745292 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g2666 | 337 | MobiDBLite | consensus disorder prediction | 170 | 190 | - | - | |
Tan02g2666 | 337 | MobiDBLite | consensus disorder prediction | 208 | 234 | - | - | |
Tan02g2666 | 337 | CDD | SNARE_syntaxin5 | 248 | 326 | - | - | |
Tan02g2666 | 337 | Pfam | Syntaxin-5 N-terminal, Sly1p-binding domain | 6 | 25 | IPR021538 | - | |
Tan02g2666 | 337 | Gene3D | - | 49 | 300 | - | - | |
Tan02g2666 | 337 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 245 | 307 | IPR000727 | - | |
Tan02g2666 | 337 | SMART | tSNARE_6 | 240 | 307 | IPR000727 | - | |
Tan02g2666 | 337 | MobiDBLite | consensus disorder prediction | 21 | 47 | - | - | |
Tan02g2666 | 337 | ProSitePatterns | Syntaxin / epimorphin family signature. | 251 | 290 | IPR006012 | GO:0005484(InterPro)|GO:0006886(InterPro)|GO:0016020(InterPro) | |
Tan02g2666 | 337 | PANTHER | SYNTAXIN | 54 | 326 | IPR045242 | GO:0000139(PANTHER)|GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006888(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER) | |
Tan02g2666 | 337 | Pfam | SNARE domain | 281 | 333 | IPR000727 | - | |
Tan02g2666 | 337 | SUPERFAMILY | t-snare proteins | 52 | 300 | IPR010989 | GO:0016020(InterPro)|GO:0016192(InterPro) | |
Tan02g2666 | 337 | MobiDBLite | consensus disorder prediction | 168 | 234 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g2666 | Tan-Chr2:94990584 | Tan04g0181 | Tan-Chr4:1471316 | 2.60E-74 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g2666 | K08490 | - | csv:101203633 | 504.212 |