Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2673 ATGATGAAAGAACTTAAGTTTGCTGTCAGAATCACACGCTCCCGGTCTAATTCCTCGAGTAGACTGGGGGCTATTTCACCCTCGTTACAACTTTCACTCAAAGAACTGCGCAAACGTGGTTACACAGCAAACTCTGAACGAGCACAACTAGATGGAAGTAATGCTCCTGCTGCAATTATCACCGTTGGCCTTCGGCGCAAAAGAAGAGCAGTGCTCAAGGATGTTACTAACATGTCCTGTGAGAGCAATAATCTGGGTGGCTGTGCAGCATCTAAAATTCAGGTGCAAGAGGTTGCACAGACCGAATCACTTGAAGATTCGTCCATTAAAAGGATGTCAGAATCACAAGGTACCTCTCCAATGATGAAGTCAGACAAAAAAGAGACAGCAGAGGAGAAGTTTCAGAGTGTCATAGGATGCAAAAATTTTGCGTTCCACGCTACAGTTTGTGAGAAATTAAACCATCTGGGTACTTTGGATGCTGTTTCAAACTCAGAAGATCCTCAAGCATGCACCCTATATGCCCATAATATATATGATACCAATCGTGTAATAGAGCTTGATCAAAGGCCTTCTACTAATTATATGGAAAAGTTACAGAAATATATCACTCCAATCATGCGAGGGATTCTGATTGATTGGCTAGTGGAGGTTTCTGAAGAATATAAGCTGGTCTATGACACACTTTACCTCACTGTGAATCTCATTGATCGGTTTCTCTCTCAAAGTTGCATTGAAAGGCATAGATTACAACTCCTTGGTGTTACTTGCATGTTAATCGCCTCTAAATATGAAGAAGTCTGTGCACCATTTGTGGAAGAGTTTTGCTTCATCACAGACAACACCTATACGAGAGGAGAGGTACTAAAAATGGAGGGTGAAGTACTGAACTTGCTCAACTTTCAGCTCTCTGTTCCCACTACAAAAACATTTCTCAGGAGATTTGTGCAGGTAGCACAGGCTTCTTGCAAGGAACCTTGCAACAAGTTTGAGCATTTGGCAAATTATCTAGCAGAGTTGACTCTTGGTGAGTACAGCTTTCTCAGATTTCTGCCTTCAGCAGTGGCTGCATCCGTGGTGTTCTTAGCCAAATGGATTCTGAATCAACAAAATCACCCATGGAATTCAGCTCTACAGCATTATACAAATTACAGTGTCTCCAAGCTAAAAACTTCAGTACTTGCCTTGGAAGATCTTAGATTGAACTCTACAAGTTGCCCTTTAAACGCCGTATTCCAGAAGTATAGACAACAGAAGTTTGGAAGTGTGGCGACTCTAACCTCCACAAAACCAGTTCTCTCAGCTTTCCAAAACAAAATCTAG 1323 41.87 MMKELKFAVRITRSRSNSSSRLGAISPSLQLSLKELRKRGYTANSERAQLDGSNAPAAIITVGLRRKRRAVLKDVTNMSCESNNLGGCAASKIQVQEVAQTESLEDSSIKRMSESQGTSPMMKSDKKETAEEKFQSVIGCKNFAFHATVCEKLNHLGTLDAVSNSEDPQACTLYAHNIYDTNRVIELDQRPSTNYMEKLQKYITPIMRGILIDWLVEVSEEYKLVYDTLYLTVNLIDRFLSQSCIERHRLQLLGVTCMLIASKYEEVCAPFVEEFCFITDNTYTRGEVLKMEGEVLNLLNFQLSVPTTKTFLRRFVQVAQASCKEPCNKFEHLANYLAELTLGEYSFLRFLPSAVAASVVFLAKWILNQQNHPWNSALQHYTNYSVSKLKTSVLALEDLRLNSTSCPLNAVFQKYRQQKFGSVATLTSTKPVLSAFQNKI 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 95034803 95042134 - Tan0005427.1 Tan02g2673 745299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2673 440 MobiDBLite consensus disorder prediction 104 123 - -
Tan02g2673 440 SMART cyclin_7 213 297 IPR013763 -
Tan02g2673 440 SMART cyclin_7 310 398 IPR013763 -
Tan02g2673 440 FunFam Cyclin A1 294 425 - -
Tan02g2673 440 Pfam Cyclin, C-terminal domain 306 427 IPR004367 -
Tan02g2673 440 FunFam Mitotic cyclin 6 191 291 - -
Tan02g2673 440 SUPERFAMILY Cyclin-like 305 428 IPR036915 -
Tan02g2673 440 PANTHER CYCLINS 152 416 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Tan02g2673 440 CDD CYCLIN_AtCycA-like_rpt2 306 420 - -
Tan02g2673 440 ProSitePatterns Cyclins signature. 208 239 IPR048258 -
Tan02g2673 440 SUPERFAMILY Cyclin-like 166 303 IPR036915 -
Tan02g2673 440 Gene3D - 178 425 - -
Tan02g2673 440 SMART Cyclin_C_2 306 429 IPR004367 -
Tan02g2673 440 MobiDBLite consensus disorder prediction 104 124 - -
Tan02g2673 440 Pfam Cyclin, N-terminal domain 178 304 IPR006671 -
Tan02g2673 440 Gene3D - 191 304 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2673 Tan-Chr2:95034803 Tan06g0344 Tan-Chr6:2682305 7.70E-95 dispersed
Tan01g3680 Tan-Chr1:101634757 Tan02g2673 Tan-Chr2:95034803 4.20E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2673 K06627 - csv:101211578 701.819