Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2695 ATGAGTAGTTCAGTGATAGTCCCACTGCCGTCGAACCTGCTGACAGATCAGGCGTCGCCGGACTGGATGAGCAAAGGCGACAACGCATGGCAGATGACGGCGGCGACACTGGTGGGACTACAGAGCGTACCGGGTCTAATAATCCTGTACGGCGGGGCGGTGAAGAAGAAATGGGCGATAAACTCGGCGTTCATGGCTCTGTACGCGTTCGCGTGCGTTTTGGTGTGCTGGGTCGGGTGGGGGTACCGGTTGTCGTTTGGGGACAAATTGGCGCCGTTTTGGGGGAAGCTGAACGTGGCTGGGAAATTGCCATCGGCGACGATGGTGTTTTTTCAATTCGTATTTGCGGCGATTACTCTGGTTTTAATCGCAGGGGCTCTGCTTGGGCGGATGAATTTCTATGCTTGGATGTTGTTTGTGCCGCTTTGGCTAACTTTTTCTTACACTTTTGTTGCGTTTAGTATTTGGAGTCCTCAAGGATTTTTCTACAAGATGGGACTTATTGATTACTCTGGTGGCTATGTCATTCATTTGTCCTCTGGAGTTGCCGGCTTTACCGCTGCATATTGGGTTGGGCCACGGCTGTCGAAAGACAGAGAAAGCTTCCCTCCGAACAACATTCTTCTGATGCTGGCCGGAGCCGGTTTGTTGTGGATGGGTTGGACCGGGTTCAACGGCGGAGACCCGTACGCCGCCAACGTGGACGCGTCACTGGCGGTTTTGAACACCCACGTTTGCACCGCCACTAGCCTCCTGACTTGGCTCATCTTCGACATCGTCTTCTTCAGAAAGCCCTCCGTCATCGGCGCCGTCCAAGGCATGATCACCGGCCTCGTTTGCATCACCCCCGCCGCAGGAGTTGTTCAAGGATGGGCAGCTATAATAATGGGAATGCTATCAGGGTCAATCCCATGGTTCACAATGATGGTGGTGGACGACACAATGGCTGTGCTTCACACTCACGCCATCGCGGGCAGTCTCGGCGGCATTCTCAGCGGCATCTTCGCCGAGCCCCGCCTCAACTTCGTCTACTACGGCGTCTACAACAAGTACATTGGCCTATTCTATGGCTTCAACTCAAAGCAAGTCAAACTCGGTTTTCGCCAACTCGGTGTCCAACTCCTCGGAATCCTCTTCGTCACGATCCTAAACGTTATCGTCACTAGCCTCATATGCGTCCTCCTCCAGTACATCGTCCCGCTCCGAATGTCCGAGGAGGACATGGCGATCGGGGACGAGGCTGCCCATGGCGAAGAGGCCTACGCCATTTGGGGCCAGGGCGAGAAGATGGATACTTCTAAGTACGATATCGAGGTCCCCGTCGTCACGAAGCATAGGCATGCAGGCCATGTTGAAATGGCATGA 1365 54.29 MSSSVIVPLPSNLLTDQASPDWMSKGDNAWQMTAATLVGLQSVPGLIILYGGAVKKKWAINSAFMALYAFACVLVCWVGWGYRLSFGDKLAPFWGKLNVAGKLPSATMVFFQFVFAAITLVLIAGALLGRMNFYAWMLFVPLWLTFSYTFVAFSIWSPQGFFYKMGLIDYSGGYVIHLSSGVAGFTAAYWVGPRLSKDRESFPPNNILLMLAGAGLLWMGWTGFNGGDPYAANVDASLAVLNTHVCTATSLLTWLIFDIVFFRKPSVIGAVQGMITGLVCITPAAGVVQGWAAIIMGMLSGSIPWFTMMVVDDTMAVLHTHAIAGSLGGILSGIFAEPRLNFVYYGVYNKYIGLFYGFNSKQVKLGFRQLGVQLLGILFVTILNVIVTSLICVLLQYIVPLRMSEEDMAIGDEAAHGEEAYAIWGQGEKMDTSKYDIEVPVVTKHRHAGHVEMA 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 95244050 95248637 + Tan0018305.1 Tan02g2695 745321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2695 454 Gene3D Ammonium transporter AmtB like domains 10 425 IPR029020 -
Tan02g2695 454 PANTHER AMMONIUM TRANSPORTER MEP2 19 432 IPR001905 GO:0005886(PANTHER)|GO:0008519(PANTHER)|GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(PANTHER)|GO:0072488(InterPro)
Tan02g2695 454 Pfam Ammonium Transporter Family 29 421 IPR024041 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Tan02g2695 454 ProSitePatterns Ammonium transporters signature. 169 194 IPR018047 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Tan02g2695 454 NCBIfam ammonium transporter 27 421 IPR001905 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Tan02g2695 454 PRINTS Rhesus blood group protein signature 208 226 IPR002229 GO:0005886(InterPro)
Tan02g2695 454 PRINTS Rhesus blood group protein signature 112 128 IPR002229 GO:0005886(InterPro)
Tan02g2695 454 PRINTS Rhesus blood group protein signature 239 261 IPR002229 GO:0005886(InterPro)
Tan02g2695 454 SUPERFAMILY Ammonium transporter 22 403 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2695 Tan-Chr2:95244050 Tan03g2133 Tan-Chr3:76085926 3.30E-149 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2695 K03320 - csv:101210590 837.025