Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g2720 | ATGCCGCGCTTGCTTCATGGGACGCTTCATGCCAATATATATGGAATCGACAAGCTTCAAACTGGATTTCCTATTTTCTGCGGGAAGGATAAAAGGTCGACAAAAAAATTTCTTGCTGGAGTGAAGAGATGCATCCTTTGCCGGCCCGAGATTGTTGGATCTAAAATGTATGCAACAGTCGATCTTGATAAGGCCCGAGTTGGCCGGACGAGAATAGTGGATCAGCCATACAGTCCTCAATGGAACGAGTATTTTCGCCTATATTGTGCCCATACAGTGTCACATGTTATATTCACGGTTAAAGATGGAGGTGTAATTGGTGCAACATTAATTGGAAGAGCCTATGTGCCTGTTGAGGATATCATTAAGGGATATGTATATGAGAAATGGGTTGAAATATTAGATGAAGACGGCAAGTCTATATATGGTCGTTCTAGAATCCATGTAAAGTTGCAATTTTCAAATGCTAATGAAGACAGGAGCTGGTCCCGAGGAATCCCAGATCCGAAGTTCGGTGGTGTACCTTTCGCATTCTTCAACCAAAGATGGGGTTGCAAAGTTTCTCTTTACCAGGATGCTCATGTTTTAAACAACTTCCTTCCTCGAGTTGGTTTGTCGGGAGGGAATTATCATGAAGTACACAGGTGTTGGGAGGATATTTTTGATGCAATTAGCAATGCGAGACACTTGATTTACATAACTGGCTGGTCTGTGTATACAGAAATAACCTTGATAAGAGACCGAGAAAGAAGAAAGACAGGAGAGGATATTACTCTTGGGCAACTGCTAAAGAAGAAGGCAGACGAAGGCGTGACTGTTTTGCTTCTTGTTTGGGATGATAGAACTTCCATTGAAGAGTTCAAGAGAGATGGTTTGATGGCAACTCACGATCAAGAAACTGCAGAATACTTCAGGGACTCAAAGGTACATTGCGTTCTATGTCCACGGAATCCTGATGAGGGTAGAAGCATAATTCAGGGGTTTGAGACTGCTACCATGTTTACTCACCACCAGAAAACACTTGTGCTTGATAGTGAAATAGCTGGTGGAAAAACAGAGAAAAGAAGGATTGTGAGTTTTGTCGGCGGTATTGATCTGTGTGATGGGAGATATGATACACCGAAACACCCTTTGTTTTCAACTCTAGATTCAATCCACTATACCGATTTTCATCAGCCTAACTTTTCAGGCTCTTCCATTAGGAAAGGTGGTCCGCGGGAACCATGGCATGACATCCATTGCCGACTAGAAGGGCCTGTTGCTTGGGATATTTTGTACAATTTTGAGCAAAGATGGCGAAAGCAAGTTGGAAACAACTTCTTGATTCCTATGCAAAAGTTTGAAGAAACAATAACCCGCCCATCAATGGTTTTACCATCAGACGACCCTGACACGTGGAATGTTCAAATATTTCGATCTATTGATGGTGGTGCAGTAGAGGGCTTTCCAGAGATACCTGAAGAGGCAGCCAAAGTGGGCCTTGTAAGTGGGAAGAATAATGTTTTAGATAGGAGTATTCAAGATGCTTATATTCATGCTATTCGCCGTGCAAAAAATTTCATATACATTGAGAATCAATATTTCCTTGGAAGCTCTTATGGTTGGAAATCAAATGGTATAAGGGTAGAAGAAATCAATGCCTTGCATCTCATTCCGAAGGAGATCTCACTAAAGATTGTGAGCAAGATTGAAGCTGGACAGAGGTTTACAGCATATATTGTGATTCCAATGTGGCCAGAAGGTATTCCTGAGAGTGCCTCAGTTCAAGCAATATTAGATTGGCAAAGGAGAACCTTAGACATGATGTACACAGATATAACTCAGGCCCTTCGAAAGAAGGGTCTCGATGCAAATCCTAGAGATTACCTGACATTCTTCTGCCTCGGCAATCGAGAGAAGATGAGGACTGGAGAATATTTGCCACCAGAGAAACCAGAGCCCAACTCGGATTATGCTCGCGCTCAAGAGTTCCGACGCTTTATGATCTATGTTCATTCAAAAATGATGATAGTTGACGATGAATACATAATTATTGGGTCTGCGAACATCAACCAAAGGTCCATGGATGGAGGAAGAGACTCTGAGATTGCAATGGGGGCTTTTCAACCTCATCACTTGGCATCTGATGAGCCTGCAAGAGGTCAAATCTATGGCTTCCGAGTGGCTCTCTGGTACGAACATCTTGGTTTGTTTGATAAAGTCTTCCAAAACCCAGAGAGTGAAGACTGCGCCCAGTTCGTCAACAAGCTCGCTCTAGAGAACTGGCAATTTTACTCAGACGATACCTTTGATGGCGATCTTCCTGGTCATCTGCTTTCCTACCCCATTGAAGTAGGCCCCAACGGATCGGTTTCGGCGCTGCCAAAATTTGAATTTTTCCCTGACACGAAGGCTCGCGTTCTTGGCCAACTGGCCGAGTATTTACCTCCAATCCTGACCACTTGA | 2445 | 43.23 | MPRLLHGTLHANIYGIDKLQTGFPIFCGKDKRSTKKFLAGVKRCILCRPEIVGSKMYATVDLDKARVGRTRIVDQPYSPQWNEYFRLYCAHTVSHVIFTVKDGGVIGATLIGRAYVPVEDIIKGYVYEKWVEILDEDGKSIYGRSRIHVKLQFSNANEDRSWSRGIPDPKFGGVPFAFFNQRWGCKVSLYQDAHVLNNFLPRVGLSGGNYHEVHRCWEDIFDAISNARHLIYITGWSVYTEITLIRDRERRKTGEDITLGQLLKKKADEGVTVLLLVWDDRTSIEEFKRDGLMATHDQETAEYFRDSKVHCVLCPRNPDEGRSIIQGFETATMFTHHQKTLVLDSEIAGGKTEKRRIVSFVGGIDLCDGRYDTPKHPLFSTLDSIHYTDFHQPNFSGSSIRKGGPREPWHDIHCRLEGPVAWDILYNFEQRWRKQVGNNFLIPMQKFEETITRPSMVLPSDDPDTWNVQIFRSIDGGAVEGFPEIPEEAAKVGLVSGKNNVLDRSIQDAYIHAIRRAKNFIYIENQYFLGSSYGWKSNGIRVEEINALHLIPKEISLKIVSKIEAGQRFTAYIVIPMWPEGIPESASVQAILDWQRRTLDMMYTDITQALRKKGLDANPRDYLTFFCLGNREKMRTGEYLPPEKPEPNSDYARAQEFRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDSEIAMGAFQPHHLASDEPARGQIYGFRVALWYEHLGLFDKVFQNPESEDCAQFVNKLALENWQFYSDDTFDGDLPGHLLSYPIEVGPNGSVSALPKFEFFPDTKARVLGQLAEYLPPILTT | 814 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 95496371 | 95500834 | + | Tan0017451.1 | Tan02g2720 | 745346 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g2720 | 814 | PIRSF | PLD_plant | 1 | 814 | IPR011402 | GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro) | |
Tan02g2720 | 814 | ProSiteProfiles | C2 domain profile. | 1 | 131 | IPR000008 | - | |
Tan02g2720 | 814 | SMART | C2_3c | 8 | 130 | IPR000008 | - | |
Tan02g2720 | 814 | Gene3D | C2 domain | 43 | 163 | IPR035892 | - | |
Tan02g2720 | 814 | SMART | pld_4 | 660 | 687 | IPR001736 | GO:0003824(InterPro) | |
Tan02g2720 | 814 | SMART | pld_4 | 332 | 370 | IPR001736 | GO:0003824(InterPro) | |
Tan02g2720 | 814 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 332 | 370 | IPR001736 | GO:0003824(InterPro) | |
Tan02g2720 | 814 | PANTHER | PHOSPHOLIPASE D | 42 | 801 | IPR015679 | GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER) | |
Tan02g2720 | 814 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 53 | 155 | IPR035892 | - | |
Tan02g2720 | 814 | Pfam | Phospholipase D C terminal | 732 | 803 | IPR024632 | - | |
Tan02g2720 | 814 | Pfam | Phospholipase D Active site motif | 662 | 687 | IPR001736 | GO:0003824(InterPro) | |
Tan02g2720 | 814 | Pfam | Phospholipase D Active site motif | 333 | 370 | IPR001736 | GO:0003824(InterPro) | |
Tan02g2720 | 814 | Gene3D | Endonuclease Chain A | 476 | 706 | - | - | |
Tan02g2720 | 814 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 660 | 687 | IPR001736 | GO:0003824(InterPro) | |
Tan02g2720 | 814 | Pfam | C2 domain | 54 | 132 | IPR000008 | - | |
Tan02g2720 | 814 | Gene3D | Endonuclease Chain A | 206 | 457 | - | - | |
Tan02g2720 | 814 | FunFam | Phospholipase D delta | 207 | 451 | - | - | |
Tan02g2720 | 814 | FunFam | Phospholipase D | 473 | 706 | - | - | |
Tan02g2720 | 814 | CDD | C2_plant_PLD | 1 | 153 | - | - | |
Tan02g2720 | 814 | SUPERFAMILY | Phospholipase D/nuclease | 494 | 743 | - | - | |
Tan02g2720 | 814 | SUPERFAMILY | Phospholipase D/nuclease | 159 | 451 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g2720 | Tan-Chr2:95496371 | Tan06g0405 | Tan-Chr6:3041041 | 0.00E+00 | dispersed | |
Tan02g2803 | Tan-Chr2:96403332 | Tan02g2720 | Tan-Chr2:95496371 | 2.70E-197 | transposed | |
Tan06g2709 | Tan-Chr6:79497338 | Tan02g2720 | Tan-Chr2:95496371 | 3.50E-35 | transposed | |
Tan02g2720 | Tan-Chr2:95496371 | Tan04g2586 | Tan-Chr4:85111037 | 0.00E+00 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g2720 | K01115 | - | csv:101207900 | 1549.64 |