Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2720 ATGCCGCGCTTGCTTCATGGGACGCTTCATGCCAATATATATGGAATCGACAAGCTTCAAACTGGATTTCCTATTTTCTGCGGGAAGGATAAAAGGTCGACAAAAAAATTTCTTGCTGGAGTGAAGAGATGCATCCTTTGCCGGCCCGAGATTGTTGGATCTAAAATGTATGCAACAGTCGATCTTGATAAGGCCCGAGTTGGCCGGACGAGAATAGTGGATCAGCCATACAGTCCTCAATGGAACGAGTATTTTCGCCTATATTGTGCCCATACAGTGTCACATGTTATATTCACGGTTAAAGATGGAGGTGTAATTGGTGCAACATTAATTGGAAGAGCCTATGTGCCTGTTGAGGATATCATTAAGGGATATGTATATGAGAAATGGGTTGAAATATTAGATGAAGACGGCAAGTCTATATATGGTCGTTCTAGAATCCATGTAAAGTTGCAATTTTCAAATGCTAATGAAGACAGGAGCTGGTCCCGAGGAATCCCAGATCCGAAGTTCGGTGGTGTACCTTTCGCATTCTTCAACCAAAGATGGGGTTGCAAAGTTTCTCTTTACCAGGATGCTCATGTTTTAAACAACTTCCTTCCTCGAGTTGGTTTGTCGGGAGGGAATTATCATGAAGTACACAGGTGTTGGGAGGATATTTTTGATGCAATTAGCAATGCGAGACACTTGATTTACATAACTGGCTGGTCTGTGTATACAGAAATAACCTTGATAAGAGACCGAGAAAGAAGAAAGACAGGAGAGGATATTACTCTTGGGCAACTGCTAAAGAAGAAGGCAGACGAAGGCGTGACTGTTTTGCTTCTTGTTTGGGATGATAGAACTTCCATTGAAGAGTTCAAGAGAGATGGTTTGATGGCAACTCACGATCAAGAAACTGCAGAATACTTCAGGGACTCAAAGGTACATTGCGTTCTATGTCCACGGAATCCTGATGAGGGTAGAAGCATAATTCAGGGGTTTGAGACTGCTACCATGTTTACTCACCACCAGAAAACACTTGTGCTTGATAGTGAAATAGCTGGTGGAAAAACAGAGAAAAGAAGGATTGTGAGTTTTGTCGGCGGTATTGATCTGTGTGATGGGAGATATGATACACCGAAACACCCTTTGTTTTCAACTCTAGATTCAATCCACTATACCGATTTTCATCAGCCTAACTTTTCAGGCTCTTCCATTAGGAAAGGTGGTCCGCGGGAACCATGGCATGACATCCATTGCCGACTAGAAGGGCCTGTTGCTTGGGATATTTTGTACAATTTTGAGCAAAGATGGCGAAAGCAAGTTGGAAACAACTTCTTGATTCCTATGCAAAAGTTTGAAGAAACAATAACCCGCCCATCAATGGTTTTACCATCAGACGACCCTGACACGTGGAATGTTCAAATATTTCGATCTATTGATGGTGGTGCAGTAGAGGGCTTTCCAGAGATACCTGAAGAGGCAGCCAAAGTGGGCCTTGTAAGTGGGAAGAATAATGTTTTAGATAGGAGTATTCAAGATGCTTATATTCATGCTATTCGCCGTGCAAAAAATTTCATATACATTGAGAATCAATATTTCCTTGGAAGCTCTTATGGTTGGAAATCAAATGGTATAAGGGTAGAAGAAATCAATGCCTTGCATCTCATTCCGAAGGAGATCTCACTAAAGATTGTGAGCAAGATTGAAGCTGGACAGAGGTTTACAGCATATATTGTGATTCCAATGTGGCCAGAAGGTATTCCTGAGAGTGCCTCAGTTCAAGCAATATTAGATTGGCAAAGGAGAACCTTAGACATGATGTACACAGATATAACTCAGGCCCTTCGAAAGAAGGGTCTCGATGCAAATCCTAGAGATTACCTGACATTCTTCTGCCTCGGCAATCGAGAGAAGATGAGGACTGGAGAATATTTGCCACCAGAGAAACCAGAGCCCAACTCGGATTATGCTCGCGCTCAAGAGTTCCGACGCTTTATGATCTATGTTCATTCAAAAATGATGATAGTTGACGATGAATACATAATTATTGGGTCTGCGAACATCAACCAAAGGTCCATGGATGGAGGAAGAGACTCTGAGATTGCAATGGGGGCTTTTCAACCTCATCACTTGGCATCTGATGAGCCTGCAAGAGGTCAAATCTATGGCTTCCGAGTGGCTCTCTGGTACGAACATCTTGGTTTGTTTGATAAAGTCTTCCAAAACCCAGAGAGTGAAGACTGCGCCCAGTTCGTCAACAAGCTCGCTCTAGAGAACTGGCAATTTTACTCAGACGATACCTTTGATGGCGATCTTCCTGGTCATCTGCTTTCCTACCCCATTGAAGTAGGCCCCAACGGATCGGTTTCGGCGCTGCCAAAATTTGAATTTTTCCCTGACACGAAGGCTCGCGTTCTTGGCCAACTGGCCGAGTATTTACCTCCAATCCTGACCACTTGA 2445 43.23 MPRLLHGTLHANIYGIDKLQTGFPIFCGKDKRSTKKFLAGVKRCILCRPEIVGSKMYATVDLDKARVGRTRIVDQPYSPQWNEYFRLYCAHTVSHVIFTVKDGGVIGATLIGRAYVPVEDIIKGYVYEKWVEILDEDGKSIYGRSRIHVKLQFSNANEDRSWSRGIPDPKFGGVPFAFFNQRWGCKVSLYQDAHVLNNFLPRVGLSGGNYHEVHRCWEDIFDAISNARHLIYITGWSVYTEITLIRDRERRKTGEDITLGQLLKKKADEGVTVLLLVWDDRTSIEEFKRDGLMATHDQETAEYFRDSKVHCVLCPRNPDEGRSIIQGFETATMFTHHQKTLVLDSEIAGGKTEKRRIVSFVGGIDLCDGRYDTPKHPLFSTLDSIHYTDFHQPNFSGSSIRKGGPREPWHDIHCRLEGPVAWDILYNFEQRWRKQVGNNFLIPMQKFEETITRPSMVLPSDDPDTWNVQIFRSIDGGAVEGFPEIPEEAAKVGLVSGKNNVLDRSIQDAYIHAIRRAKNFIYIENQYFLGSSYGWKSNGIRVEEINALHLIPKEISLKIVSKIEAGQRFTAYIVIPMWPEGIPESASVQAILDWQRRTLDMMYTDITQALRKKGLDANPRDYLTFFCLGNREKMRTGEYLPPEKPEPNSDYARAQEFRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDSEIAMGAFQPHHLASDEPARGQIYGFRVALWYEHLGLFDKVFQNPESEDCAQFVNKLALENWQFYSDDTFDGDLPGHLLSYPIEVGPNGSVSALPKFEFFPDTKARVLGQLAEYLPPILTT 814
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 95496371 95500834 + Tan0017451.1 Tan02g2720 745346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2720 814 PIRSF PLD_plant 1 814 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Tan02g2720 814 ProSiteProfiles C2 domain profile. 1 131 IPR000008 -
Tan02g2720 814 SMART C2_3c 8 130 IPR000008 -
Tan02g2720 814 Gene3D C2 domain 43 163 IPR035892 -
Tan02g2720 814 SMART pld_4 660 687 IPR001736 GO:0003824(InterPro)
Tan02g2720 814 SMART pld_4 332 370 IPR001736 GO:0003824(InterPro)
Tan02g2720 814 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 332 370 IPR001736 GO:0003824(InterPro)
Tan02g2720 814 PANTHER PHOSPHOLIPASE D 42 801 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Tan02g2720 814 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 53 155 IPR035892 -
Tan02g2720 814 Pfam Phospholipase D C terminal 732 803 IPR024632 -
Tan02g2720 814 Pfam Phospholipase D Active site motif 662 687 IPR001736 GO:0003824(InterPro)
Tan02g2720 814 Pfam Phospholipase D Active site motif 333 370 IPR001736 GO:0003824(InterPro)
Tan02g2720 814 Gene3D Endonuclease Chain A 476 706 - -
Tan02g2720 814 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 660 687 IPR001736 GO:0003824(InterPro)
Tan02g2720 814 Pfam C2 domain 54 132 IPR000008 -
Tan02g2720 814 Gene3D Endonuclease Chain A 206 457 - -
Tan02g2720 814 FunFam Phospholipase D delta 207 451 - -
Tan02g2720 814 FunFam Phospholipase D 473 706 - -
Tan02g2720 814 CDD C2_plant_PLD 1 153 - -
Tan02g2720 814 SUPERFAMILY Phospholipase D/nuclease 494 743 - -
Tan02g2720 814 SUPERFAMILY Phospholipase D/nuclease 159 451 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2720 Tan-Chr2:95496371 Tan06g0405 Tan-Chr6:3041041 0.00E+00 dispersed
Tan02g2803 Tan-Chr2:96403332 Tan02g2720 Tan-Chr2:95496371 2.70E-197 transposed
Tan06g2709 Tan-Chr6:79497338 Tan02g2720 Tan-Chr2:95496371 3.50E-35 transposed
Tan02g2720 Tan-Chr2:95496371 Tan04g2586 Tan-Chr4:85111037 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2720 K01115 - csv:101207900 1549.64