Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2751 ATGCCCAGACCACAGCAAAGATATCGCGGCGTCCGACAGCGCCATTGGGGCTCTTGGGTCTCCGAAATCCGTCATCCTTTATTGAAGACAAGAATTTGGCTTGGCACATTCGAGACCGCAGAAGATGCAGCGCGAGCATACGACGAAGCTGCACGACTTATGTGCGGACCGAGGGCACGTACCAACTTCCCTTACGACGCCTCTCTATCTCGCTCCTCCTCCTCCCGCCTTCTCTCGGCCACTTTGACTGCCAAGCTCCACCGTTGCTACATGGCGTCGCTGCAGCTGACAAAGCAATCCTCCTCCGCTGCGCGTCGCCCTCAAACCGATCCAACTCGAACCGATTTCATTGTGGCTTCTGGCATTGTCCCGATGGAGCGAGTGGAAGCGGAGACGACGACGAAGAAAGTCAAACTGGAGAGAAAGGATTGCGGGGAGCCGTTGATGATTGAGATGTTGGATGATGATCATATACAACAAATGATTGAGGAGTTGCTTGATTATGGTGGAATTGAGCTCCGGTCTGCCTCCGTCGTGCAACCTCAGGCCATCTGA 555 54.41 MPRPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDPTRTDFIVASGIVPMERVEAETTTKKVKLERKDCGEPLMIEMLDDDHIQQMIEELLDYGGIELRSASVVQPQAI 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 95766580 95767599 + Tan0012254.1 Tan02g2751 745377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2751 184 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2751 184 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2751 184 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2751 184 Pfam AP2 domain 7 56 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2751 184 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677(InterPro)
Tan02g2751 184 FunFam Ethylene-responsive transcription factor 2 6 65 - -
Tan02g2751 184 SMART rav1_2 7 70 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2751 184 CDD AP2 6 66 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2751 184 Gene3D AP2/ERF domain 6 66 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2751 184 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 124 IPR050913 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2751 Tan-Chr2:95766580 Tan04g2523 Tan-Chr4:84285541 8.60E-40 dispersed
Tan02g2751 Tan-Chr2:95766580 Tan02g2752 Tan-Chr2:95774936 1.00E-53 tandem
Tan01g3590 Tan-Chr1:100944558 Tan02g2751 Tan-Chr2:95766580 6.70E-52 wgd
Tan02g2751 Tan-Chr2:95766580 Tan06g0461 Tan-Chr6:3338953 2.30E-45 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26869 PF00847 AP2 7.50E-12 CL0081 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2751 - - - 0.0