Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g2752 | ATGGCCAGGCCTCAACAGCGTTATCGAGGCGTTCGTCAAAGGCATTGGGGCTCTTGGGTTTCCGAAATTCGTCACCCTATATTGAAAACCAGAATTTGGCTGGGCACTTTCGAAACGGCTGAAGATGCCGCAAGAGCTTACGACGAAGCCGCTCGACTAATGTGCGGCCCTAGAGCAAGAACCAATTTCCCTTTCAACGGAAACGATTCCAATTCCTCTTCTTCTAAACTCCTCTCTGCAAATTTAACCGCGAAGCTCCACCGTTGTTACATGGCGTCTCTCCATTTGACGAACCCATCGCCGCAGAAACCCGCCGCGACCGGGAATAAGCTCCTGACGGCTGAGAAGAAAAGGGTGGCGGCGACAACGGCGGAGAATTGGGTGGCGAAAAATGCCCAAACGGAGAACGCCGCTCATCAGCCGTTTGAAGCTCTGGAAGAGGATCATATCGAACAGATGATTGAGGAATTGATTCATTATGGGTCTGTGGAGCTCTGTTCTTCTGTTGTGCCGCCGGCTCCGGCGTTTTGA | 531 | 52.17 | MARPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPFNGNDSNSSSSKLLSANLTAKLHRCYMASLHLTNPSPQKPAATGNKLLTAEKKRVAATTAENWVAKNAQTENAAHQPFEALEEDHIEQMIEELIHYGSVELCSSVVPPAPAF | 176 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 95774936 | 95775921 | + | Tan0000968.1 | Tan02g2752 | 745378 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g2752 | 176 | SMART | rav1_2 | 7 | 70 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2752 | 176 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 4 | 126 | IPR050913 | - | |
Tan02g2752 | 176 | Pfam | AP2 domain | 7 | 56 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2752 | 176 | SUPERFAMILY | DNA-binding domain | 7 | 65 | IPR016177 | GO:0003677(InterPro) | |
Tan02g2752 | 176 | CDD | AP2 | 6 | 64 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2752 | 176 | ProSiteProfiles | AP2/ERF domain profile. | 7 | 64 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2752 | 176 | Gene3D | AP2/ERF domain | 6 | 65 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2752 | 176 | PRINTS | Ethylene responsive element binding protein signature | 8 | 19 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2752 | 176 | PRINTS | Ethylene responsive element binding protein signature | 30 | 46 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2752 | 176 | FunFam | Ethylene-responsive transcription factor 2 | 6 | 66 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g3590 | Tan-Chr1:100944558 | Tan02g2752 | Tan-Chr2:95774936 | 5.30E-57 | dispersed | |
Tan01g3651 | Tan-Chr1:101400068 | Tan02g2752 | Tan-Chr2:95774936 | 3.40E-26 | dispersed | |
Tan02g2752 | Tan-Chr2:95774936 | Tan06g0461 | Tan-Chr6:3338953 | 2.90E-45 | dispersed | |
Tan02g2751 | Tan-Chr2:95766580 | Tan02g2752 | Tan-Chr2:95774936 | 1.00E-53 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26870 | PF00847 | AP2 | 3.90E-12 | CL0081 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g2752 | - | - | - | 0.0 |