Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2752 ATGGCCAGGCCTCAACAGCGTTATCGAGGCGTTCGTCAAAGGCATTGGGGCTCTTGGGTTTCCGAAATTCGTCACCCTATATTGAAAACCAGAATTTGGCTGGGCACTTTCGAAACGGCTGAAGATGCCGCAAGAGCTTACGACGAAGCCGCTCGACTAATGTGCGGCCCTAGAGCAAGAACCAATTTCCCTTTCAACGGAAACGATTCCAATTCCTCTTCTTCTAAACTCCTCTCTGCAAATTTAACCGCGAAGCTCCACCGTTGTTACATGGCGTCTCTCCATTTGACGAACCCATCGCCGCAGAAACCCGCCGCGACCGGGAATAAGCTCCTGACGGCTGAGAAGAAAAGGGTGGCGGCGACAACGGCGGAGAATTGGGTGGCGAAAAATGCCCAAACGGAGAACGCCGCTCATCAGCCGTTTGAAGCTCTGGAAGAGGATCATATCGAACAGATGATTGAGGAATTGATTCATTATGGGTCTGTGGAGCTCTGTTCTTCTGTTGTGCCGCCGGCTCCGGCGTTTTGA 531 52.17 MARPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPFNGNDSNSSSSKLLSANLTAKLHRCYMASLHLTNPSPQKPAATGNKLLTAEKKRVAATTAENWVAKNAQTENAAHQPFEALEEDHIEQMIEELIHYGSVELCSSVVPPAPAF 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 95774936 95775921 + Tan0000968.1 Tan02g2752 745378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2752 176 SMART rav1_2 7 70 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2752 176 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 126 IPR050913 -
Tan02g2752 176 Pfam AP2 domain 7 56 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2752 176 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677(InterPro)
Tan02g2752 176 CDD AP2 6 64 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2752 176 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2752 176 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2752 176 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2752 176 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g2752 176 FunFam Ethylene-responsive transcription factor 2 6 66 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3590 Tan-Chr1:100944558 Tan02g2752 Tan-Chr2:95774936 5.30E-57 dispersed
Tan01g3651 Tan-Chr1:101400068 Tan02g2752 Tan-Chr2:95774936 3.40E-26 dispersed
Tan02g2752 Tan-Chr2:95774936 Tan06g0461 Tan-Chr6:3338953 2.90E-45 dispersed
Tan02g2751 Tan-Chr2:95766580 Tan02g2752 Tan-Chr2:95774936 1.00E-53 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26870 PF00847 AP2 3.90E-12 CL0081 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2752 - - - 0.0