Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2759 ATGGCGTCTTCGGACAAGGATGTCGAAGAACAGCTTTTGGAAGCTGGCAATAAGATTGTTGACCCCCCTACTTCAGTTGAAGAGCTTCTACCTCTTCTCGACAAAATTGAGAGTTTGCTGGCAAGGGTTGAACAATCCCCTTCAAAATCAATGCAAAGTGCGCTCGCTCCATCACTGAAAGCACTGGTTTCTGATCAGCTTCTAAGGCATTCGGATATTGATGTCAAAGTAGCAGTTGCTGCATGCATTAGTGAAATAACTAGGATCACTGCACCCGATGCCCCTTATAATGATGAGCAAATGAAGGAGGTATTTCATCTTATTGTATCATCGTTTGAAAATCTCTCGGACAAGTCGAGTCGATCATATGCAAAGAGGGCATCCATTCTTGAAACTGTAGCAAAGGTCAGATCGTGTGTGGTCATGCTGGATTTGGAATGTGATGGATTGATCATTGAGATGTTCCAACATTTCCTTAAGACAGTAAGAGATTATCACCCAGAGAATGTATTTTCGTCAATGGAGACAATTATGAGCCTTGTTTTGGAAGAAAGTGAAGATATATCGGTAGAGCTCCTCTCTCCCATCTTAGATAGTGTGAAGAAGGACAATGAGGAAATTCTACCCATTGCTCGGAAGTTAGGAGAGAGAGTTCTTGATAACTGTTCTACTAAGCTCAAACCTTATTTGGTTCAAGCTGTAAAAACCTTGGGAATTTCTTTTGATCATTATAGTGATGTTGTTGCTTCCATATGCAAAGATCTTTCTGGCTCTCTTGATCCAAGTAATCTTCATGGTGCTGGTGAAAACATGGTTGCTGAGAGCAAGTCAGTTAGAACGTCTGGGGAAGAGGTTGAAGAGAAACCCACAGAAGTGGCCACGCCCGAGAGAGTTGATACGGCCATTGAGAAACATCATGACTCGGTTAAGAGCAATGGAGTTGCACCGGGGGGTGAGGATGGCTCCGTCTCTAATTTGGAGAATAAGAAAGAAGAACATGGTCAGGAGTGCAAAGAGGTGAAATCACCCAAAAGTTCTGAACCTGCTAATTTGGGCTCTGAGAAGGCTAGCAATGTGAAGGAAAGATCTGAAAAGACCTCTAGGAAAAGAGGTAGAAAATCTAATCAATCCTCGAAATCTACTGAAGTTCCTCATGTTGATGCCCCAAAGGGATCTGAGAGTCAGCCTGAACATGAAAGCCATAGTGAACATCCTGGTTCTTCTCGTGAGGACCAGTCTGCTGAAAATTTGCCTTCAGAAAATGAGGCTGATGCCAAGCCGCCTTCACCCAAGGCTGTGGAGATTGAATCTTCAAATGTTGCTTCACCTTCCCTTAGTGGAAGCGTTCCTGATGAGTGTAACAATAAGTCTGGACAGGGAAATAAGGCTGGGCAGGCAAAAAAGAAAGGCAACTCAGCTAAAGAGGTGGCATCATCTGCAGAAGTTTCAAAAAAATCATCTGACGGAATGAATGACTCGGGAGCAAAGCTTGATTCACATGCTGAAGATAAGGCTCCTGCTGGGGTTTCCGATGATTCTAAGACTGCAGTTGAAGATGTAGCAGAAAGGGAAAGTGACACTACCAGTGATTCTGAGGCTAAGACGTTGAAGCAGTCTGCTAGGAAGGGAGATGGAACCAGTAAGAGTGGTGGTGGATCTTTAAAACAATCGGATGCTAAGAAAAAGAAGGGATCAGGGAAATCTATTTCTGGAAAAACCGTAAAAAAGTTGTCAGGCGATGATGATAAAAAGGAAACAACACCTGTGCAGAAACCAACCTCGAAAACCACCAAAGATGAGAAGATCTTGGACAAGACTACAACACCAGCTTCCAAGAGGAAACGAACTCCTAGCAAAGAAAAAGGGTCTGAGACCAAGGAGTTTGATGAAACTTTGATTGGTTCCAAGATAAAAGTGTGGTGGCCAAAAGATCGCATGTTTTATGCAGGCATTGTCGATTCTTTTGATCCTGAAAAAAGGAAGCACAAGGTTTTGTACACGGATGGAGATGAAGAAATACTAAATCTTAAAAAGGAGAAATGGGAATTTATTGATGATGACTCTGGATCTGAACGGGAGCAAACAGCAGATTTAGTGAGATCAGAATCTGCAGCAGAGACACCTCAAAAGAAAAAGGCAAAAGTAAATGCCAACGAGTCTGCTAAGCGAGGAAAGATGGATGGTTCACCCAAAAAGGGTGGAGTAACTTCCTCCAGCAAATCTAAGGGTCCAGCTACAAAAACTGATCGTAGTGGCAGCAAAATTCAAGGCAAGCCGAAAGAGAATACCCCCAAGGTTGGAAGACCTACAACTGTTACAGGTAGCAAATCCAAGGATCAAACCACTCCTAAAACTGGTAGCAAGGCTAGTAGCACAGGTCCGAAAATTGCTGGCAAGTCGAGGAATGATGATGCTGAATCACACAAGACTGGCAAATCGAAGGATGACGAGACGTCTACACCTGCTACTTCTGTGAAGTCCAAGCAAGATGTATCGAAGACGGGGAAGTCCAAACAAGAGACTCCAAAACCTCCTGCCATTTCAAAGGGCAAATCTCCCAAAACAGGCGATAAACCCAATAATTCCAATCTCTCCACCAAGGTCAAGTTCACATCTTCAAAATCAAAAGAAAGTGGAGATTTGAAGAGTTCGACTGGTTCTGGAAAAACAATGGAAAATTCAAAGGGGAAGTCTCTAAATTCATCCAATGATCAGCCCAGTGAATCCAAGTCAGGAAAGAAAAGAAGAAGAGAGTCAAAAGGTTGA 2766 43.13 MASSDKDVEEQLLEAGNKIVDPPTSVEELLPLLDKIESLLARVEQSPSKSMQSALAPSLKALVSDQLLRHSDIDVKVAVAACISEITRITAPDAPYNDEQMKEVFHLIVSSFENLSDKSSRSYAKRASILETVAKVRSCVVMLDLECDGLIIEMFQHFLKTVRDYHPENVFSSMETIMSLVLEESEDISVELLSPILDSVKKDNEEILPIARKLGERVLDNCSTKLKPYLVQAVKTLGISFDHYSDVVASICKDLSGSLDPSNLHGAGENMVAESKSVRTSGEEVEEKPTEVATPERVDTAIEKHHDSVKSNGVAPGGEDGSVSNLENKKEEHGQECKEVKSPKSSEPANLGSEKASNVKERSEKTSRKRGRKSNQSSKSTEVPHVDAPKGSESQPEHESHSEHPGSSREDQSAENLPSENEADAKPPSPKAVEIESSNVASPSLSGSVPDECNNKSGQGNKAGQAKKKGNSAKEVASSAEVSKKSSDGMNDSGAKLDSHAEDKAPAGVSDDSKTAVEDVAERESDTTSDSEAKTLKQSARKGDGTSKSGGGSLKQSDAKKKKGSGKSISGKTVKKLSGDDDKKETTPVQKPTSKTTKDEKILDKTTTPASKRKRTPSKEKGSETKEFDETLIGSKIKVWWPKDRMFYAGIVDSFDPEKRKHKVLYTDGDEEILNLKKEKWEFIDDDSGSEREQTADLVRSESAAETPQKKKAKVNANESAKRGKMDGSPKKGGVTSSSKSKGPATKTDRSGSKIQGKPKENTPKVGRPTTVTGSKSKDQTTPKTGSKASSTGPKIAGKSRNDDAESHKTGKSKDDETSTPATSVKSKQDVSKTGKSKQETPKPPAISKGKSPKTGDKPNNSNLSTKVKFTSSKSKESGDLKSSTGSGKTMENSKGKSLNSSNDQPSESKSGKKRRRESKG 921
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 95896539 95912166 + Tan0010795.1 Tan02g2759 745385

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2759 921 MobiDBLite consensus disorder prediction 263 628 - -
Tan02g2759 921 MobiDBLite consensus disorder prediction 357 371 - -
Tan02g2759 921 CDD Tudor_Agenet_AtEML-like 633 683 - -
Tan02g2759 921 SUPERFAMILY Tudor/PWWP/MBT 631 673 - -
Tan02g2759 921 Gene3D - 629 681 - -
Tan02g2759 921 MobiDBLite consensus disorder prediction 495 541 - -
Tan02g2759 921 MobiDBLite consensus disorder prediction 766 797 - -
Tan02g2759 921 MobiDBLite consensus disorder prediction 732 752 - -
Tan02g2759 921 MobiDBLite consensus disorder prediction 324 343 - -
Tan02g2759 921 MobiDBLite consensus disorder prediction 476 493 - -
Tan02g2759 921 Pfam Sister chromatid cohesion protein PDS5 protein 27 232 - -
Tan02g2759 921 MobiDBLite consensus disorder prediction 799 821 - -
Tan02g2759 921 SUPERFAMILY ARM repeat 26 251 IPR016024 -
Tan02g2759 921 MobiDBLite consensus disorder prediction 435 466 - -
Tan02g2759 921 MobiDBLite consensus disorder prediction 391 410 - -
Tan02g2759 921 MobiDBLite consensus disorder prediction 854 907 - -
Tan02g2759 921 MobiDBLite consensus disorder prediction 681 729 - -
Tan02g2759 921 MobiDBLite consensus disorder prediction 681 921 - -
Tan02g2759 921 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 472 830 IPR039776 GO:0000785(PANTHER)|GO:0005634(PANTHER)|GO:0006281(PANTHER)|GO:0007064(PANTHER)|GO:0007064(InterPro)
Tan02g2759 921 MobiDBLite consensus disorder prediction 279 310 - -
Tan02g2759 921 MobiDBLite consensus disorder prediction 574 628 - -
Tan02g2759 921 FunFam Binding protein 628 680 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2759 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3997 Tan-Chr1:104884034 Tan02g2759 Tan-Chr2:95896539 7.00E-32 transposed
Tan05g1848 Tan-Chr5:62736873 Tan02g2759 Tan-Chr2:95896539 6.50E-17 transposed
Tan02g2759 Tan-Chr2:95896539 Tan06g0467 Tan-Chr6:3387746 2.10E-86 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g511 . . . . . . . . . . . . . . Sed01g1394 . . Bhi04g00044 Tan02g2759 Cmetu12g0413 . Hepe10g0220 . Lcy13g1828 . . . . . . . . . . . . . . . . Blo18g00010 . Bda13g01244 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002456 2 4 2 1 1 1 2 1 1 1 1 1 2 1 2 2 1 4 2 1 1 2 2 2 2 3 1 3 1 4 54