Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2764 ATGGCATTAAACGACGACGCATCGAGAAAGACGACAGGGTCGGTGTTGGGCCAAAAGCGAAACCTTCCGGTCAGCAACGCCGCCATTGCTGTAGCCGGAATCGTCGCCGTCGGCCTCGGCTACATGTTTTATGTCAATAGATCATCAAATAATTCTACCAGAGATATTACCCGACACGGCGCTTCTCAGAAGCCACCAGAGAGATCTTGGTCGGAGGAAAAACCAGTACCTGGAAAATCCCTTCTTCACAAGCTCAATCTCTCAATCAATGGGCTGAAAGCACTCGATTTCGCGTCGGCGACACTCTCGGTAACTTCCTATGTAGTACGATTTATGTGGAATTACGAAGAAGGGAAAGATTCAGTACTGAAAGTGACGAAGGAAGATTATGAAGCCTGCAACACTAAGAACCCAGAACAGAAATTCGAGGATGGCAAAACGAAGGTGGAGTTACAGAAGCCAGGCCCATTCTACTTCATCAGTGGAGCAAACGGCCATTGCCAGCAGGGCCAGAAGCTGGTCGTTGTCGTTATGACTCCTCGCCACAGATTCATCGGCATCTCTCCGGCGCCTTCTCCGGCGGAGATCGAGGCTCCGGCGGTTGCTCCGTCGAGCGGAGCTGCAAGTTTGAAGGTTGGGATTTTGGCTGTCGTTGTGGGGATTTTAGGTTTTGGGGTTGCTTTCGTTTGA 690 50.72 MALNDDASRKTTGSVLGQKRNLPVSNAAIAVAGIVAVGLGYMFYVNRSSNNSTRDITRHGASQKPPERSWSEEKPVPGKSLLHKLNLSINGLKALDFASATLSVTSYVVRFMWNYEEGKDSVLKVTKEDYEACNTKNPEQKFEDGKTKVELQKPGPFYFISGANGHCQQGQKLVVVVMTPRHRFIGISPAPSPAEIEAPAVAPSSGAASLKVGILAVVVGILGFGVAFV 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 96006214 96011477 + Tan0019092.1 Tan02g2764 745390

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2764 229 SUPERFAMILY Cupredoxins 112 178 IPR008972 -
Tan02g2764 229 PANTHER BLUE COPPER PROTEIN 111 186 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Tan02g2764 229 MobiDBLite consensus disorder prediction 53 76 - -
Tan02g2764 229 MobiDBLite consensus disorder prediction 60 76 - -
Tan02g2764 229 Gene3D - 68 181 IPR008972 -
Tan02g2764 229 Pfam Plastocyanin-like domain 112 171 IPR003245 GO:0009055(InterPro)
Tan02g2764 229 ProSiteProfiles Phytocyanin domain profile. 85 179 IPR003245 GO:0009055(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2764 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2764 Tan-Chr2:96006214 Tan11g0690 Tan-Chr11:5982009 8.50E-13 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g584 . . . . Bpe02g01264 . . . Cmo05g00351 Cmo12g00319 . Cma05g00347 . Car12g00349 Sed11g1139 Cpe07g00325 . Bhi04g00052 Tan02g2764 Cmetu03g2012 . Hepe10g0215 . Lcy13g1834 . . . . . . . . . Cone17ag0978 Cone20ag0319 Lsi04g02065 . . . . . Bda01g01015 . . . . . . . . . Cma12g00366 . Car05g00293 . . . . . . . . . Cla08g01369 Cam08g1838 Cec08g1417 Cco08g1549 Clacu08g1533 . Cre08g1316 Lsi08g01251 . Chy03g01081 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010533 1 1 0 0 1 1 2 1 1 1 1 1 2 0 1 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 31