Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2827 ATGTCTTTCTTCACCTTTCTTCTCCTCTTTTCTTCCCTCCTTCTTCCCTCTCTCAATGCCTTGACCTACCACTACTACGACCGCACGTGCCCTAATCTCGAGTCCATCGTCGCCCGAGAAGTCCATTTCGCCACCGTTAACGACAAGACGGTCCCTGCGGCGCTGCTCCGAATGCACTTCCATGACTGTTTCATTAGAGGTTGTGATGGGTCTGTGCTTCTTGACTCTAAGGGGAAGAACACTGCTGAAAAAGATGGCCCTCCCAATATATCATTACATGCTTTTTATGTCATTGACAATGCCAAGAAGGCCATTGAATCTGCCTGCCCTGGCGTCGTTTCTTGCGCTGATATCTTGGCCATCGCTGCTCGTGATGCTGTTGTTTTGTCTGGAGGTCCTCATTGGGAAGTCACAAAAGGAAGAAAAGATGGAAGAATCTCAAAAGCAAGTGAAACAAGACAATTGCCTGCTCCCACATTCAACTTCTCTCAGCTCCAACAAAGCTTCTCTCAAAGAGGCCTTTCTCTACAAGATCTTGTAGCCCTTTCAGGCGGCCACACGCTTGGATTCGCCCATTGCTCCTCGTTCCAAAACCGAATCCACAACTTCAACTCGACCCTCGACATCGACCCGTCGCTGCAGCCGTCATTCGCCACCAGCCTCCGGAGCGTATGTCCGGCTCACAACAAGGTGAAAAACGCCGGCTCGGCCATGGATTCAACTTCCACACTATTTGACAATGCATATTTCAAGCTGCTTCTTCAAGGGCACAGCATTTTTTCTTCAGATCAATCTTTGCTTTCAACTCCCAAAACAAAGGCTTTGGTTTCTAAGTTCGCCGACGAACAACAGCTCTTTGAGAAGGCTTTCGTGAAATCGATGGTCAAGATGAGTCGGATCGCCGCCGCCGGCCAAGAAGTCCGGCTAAACTGCAGGGTGGTCAGATGA 948 49.58 MSFFTFLLLFSSLLLPSLNALTYHYYDRTCPNLESIVAREVHFATVNDKTVPAALLRMHFHDCFIRGCDGSVLLDSKGKNTAEKDGPPNISLHAFYVIDNAKKAIESACPGVVSCADILAIAARDAVVLSGGPHWEVTKGRKDGRISKASETRQLPAPTFNFSQLQQSFSQRGLSLQDLVALSGGHTLGFAHCSSFQNRIHNFNSTLDIDPSLQPSFATSLRSVCPAHNKVKNAGSAMDSTSTLFDNAYFKLLLQGHSIFSSDQSLLSTPKTKALVSKFADEQQLFEKAFVKSMVKMSRIAAAGQEVRLNCRVVR 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 96566324 96567615 - Tan0008608.1 Tan02g2827 745453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2827 315 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g2827 315 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g2827 315 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g2827 315 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g2827 315 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g2827 315 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g2827 315 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g2827 315 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g2827 315 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g2827 315 Pfam Peroxidase 39 281 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g2827 315 FunFam Peroxidase 156 297 - -
Tan02g2827 315 Gene3D Peroxidase, domain 2 156 297 - -
Tan02g2827 315 Gene3D - 24 314 - -
Tan02g2827 315 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Tan02g2827 315 FunFam Peroxidase 24 162 - -
Tan02g2827 315 SUPERFAMILY Heme-dependent peroxidases 21 314 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g2827 315 ProSiteProfiles Plant heme peroxidase family profile. 20 315 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g2827 315 PANTHER PEROXIDASE 25-RELATED 22 311 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Tan02g2827 315 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g2827 315 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g2827 315 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g2827 315 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g2827 315 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g2827 315 CDD secretory_peroxidase 21 314 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2827 Tan-Chr2:96566324 Tan03g0044 Tan-Chr3:5475765 1.50E-71 dispersed
Tan01g0308 Tan-Chr1:2613111 Tan02g2827 Tan-Chr2:96566324 1.10E-98 transposed
Tan03g2114 Tan-Chr3:75970645 Tan02g2827 Tan-Chr2:96566324 1.50E-111 transposed
Tan02g2827 Tan-Chr2:96566324 Tan04g1281 Tan-Chr4:12381241 3.90E-56 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2827 K00430 - csv:101214403 544.658