Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2877 ATGGCGGCTCGGAGGATATCCTCGCTCTTATCTCGTTCCCTTGCTTCTTCACCTGCTCTCCTTTCCAAAGGGAGGAGGCCCAGAACAACTAGCAAATATAGCACTGCGGCTGCTGTTGAAGACCCGATTAATCCATCTGTGAAAGTAAATTACACCCAGCTGCTGATCAACGGACAATTTGTGGATTCAGTCTCAGGAAAAACGTTTCCTACACTGGACCCTAGGACTGGAGAAGTCATTGCGAATGTTGCTGAAGGTGACGCCAGAGATATTGATCTTGCAGTTTCCGCTGCACGCAGGGCATTTGATCAAGGGCCATGGCCTAGAATGACTGCTTATGAAAGATCAAAGATAATTTTGCGATTTGCCGATTTGGTTGAAAAGCATGCAGATGACGTTGCAGCGCTCGAAACTTGGGACAATGGGAAAACATACGAACAGTCAGCCAAACTGGAAGTCCCAATGTTTGTACGCCTCTTCCGATACTATGCCGGATGGGCCGATAAGATTCATGGACTCACAGTTCCAGCTGATGGCTCGTATCATGTGCAGACCTTGCACGAACCAATTGGTGTTGCGGGTCAGATTATTCCATGGAACTTTCCACTGCTTATGTTTGCTTGGAAGGTTGGTCCAGCATTAGCATGTGGGAATACTATTGTTCTGAAGACAGCCGAGCAGACACCTTTGTCTGCTCTCTATGTGGCTAAGCTATTGCATGAGGCTGGACTTCCAGAGGGCGTTCTCAATATTGTTTCCGGTTATGGGCCCACTGCTGGTGCTGCTCTTGCCAGTCACATGGAAGTTGATAAGCTTGCTTTTACTGGATCAACCGAAACAGGGAAGATAGTACTTGAACTAGCTGCAAAAAGCAATCTGAAGCCAGTAACGTTGGAGCTTGGTGGAAAATCCCCTTTCATTGTATGTGAGGATGCTGATGTGGATAAGGCTGTCGAGATGGCACACTTTGCTCTCTTCTTCAACCAGGGACAATGCTGCTGTGCTGGTTCTCGTACTTTTGTTCATGAAAAATTGTATGATGAGTTTCGAGAAAAAGCAAGGAAACGGGCTGCAAACCGTGTTGTTGGTGATCCATTCCTAGGCGGAATTGAGCAAGGTCCTCAGGTCGATGGCGAACAATTCAAAAAGATTTTGAGATATATAAAATCTGGGATTGAAGGTGGAGCCACTCTCGAAGCTGGAGGAGAGAGGTTTGGCTCCAAGGGTTACTATGTCCAGCCCACAGTTTTCTCGAATGTCAAGGATGACATGGCAATTGCACAGGAGGAGATTTTTGGTCCTGTGCAGACAATCTTGAAATACAAAGAGGTTGAGGAGGTGATAAGGAGGGCAAATGCTAGTCGCTATGGGCTGGCCGCTGGTGTGTTTACTCAAAATATAGACACAGCCAACAGGCTGACCCGTGCGCTGAGAGTTGGGTCTGTGTGGATCAATTGCTTCGATATATTTGATGCTGCAATTCCTTTTGGTGGGTACAAGATGAGTGGACATGGGCGAGAAAAGGGTATTTACAGCCTCAGCAATTACCTGCAAGTGAAGGCTGTTGTCACTCCTTTGGACAACCCTGCTTGGCTCTAG 1599 47.22 MAARRISSLLSRSLASSPALLSKGRRPRTTSKYSTAAAVEDPINPSVKVNYTQLLINGQFVDSVSGKTFPTLDPRTGEVIANVAEGDARDIDLAVSAARRAFDQGPWPRMTAYERSKIILRFADLVEKHADDVAALETWDNGKTYEQSAKLEVPMFVRLFRYYAGWADKIHGLTVPADGSYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVAKLLHEAGLPEGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTETGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVEMAHFALFFNQGQCCCAGSRTFVHEKLYDEFREKARKRAANRVVGDPFLGGIEQGPQVDGEQFKKILRYIKSGIEGGATLEAGGERFGSKGYYVQPTVFSNVKDDMAIAQEEIFGPVQTILKYKEVEEVIRRANASRYGLAAGVFTQNIDTANRLTRALRVGSVWINCFDIFDAAIPFGGYKMSGHGREKGIYSLSNYLQVKAVVTPLDNPAWL 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 97067790 97071965 - Tan0011058.1 Tan02g2877 745503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2877 532 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 46 524 - GO:0004029(PANTHER)
Tan02g2877 532 FunFam Mitochondrial aldehyde dehydrogenase 2 304 493 - -
Tan02g2877 532 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 326 337 IPR016160 GO:0016491(InterPro)
Tan02g2877 532 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 56 520 IPR016162 GO:0016491(InterPro)
Tan02g2877 532 FunFam Aldehyde dehydrogenase, putative 494 520 - -
Tan02g2877 532 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 298 305 IPR029510 GO:0016491(InterPro)
Tan02g2877 532 CDD ALDH_F2BC 49 524 - -
Tan02g2877 532 SUPERFAMILY ALDH-like 48 525 IPR016161 GO:0016491(InterPro)
Tan02g2877 532 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 56 326 - -
Tan02g2877 532 Pfam Aldehyde dehydrogenase family 60 522 IPR015590 GO:0016491(InterPro)
Tan02g2877 532 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 302 491 IPR016163 GO:0016620(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2877 Tan-Chr2:97067790 Tan09g2233 Tan-Chr9:72300960 2.00E-251 dispersed
Tan02g2877 Tan-Chr2:97067790 Tan02g2878 Tan-Chr2:97067790 6.30E-301 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2877 K00128 - csv:101202756 966.066