Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2878 ATGAGGAGGAGGCCCAGAACAACTAGCAAATATAGCACTGCGGCTGCTGTTGAAGACCCGATTAATCCATCTGTGAAAGTAAATTACACCCAGCTGCTGATCAACGGACAATTTGTGGATTCAGTCTCAGGAAAAACGTTTCCTACACTGGACCCTAGGACTGGAGAAGTCATTGCGAATGTTGCTGAAGGTGACGCCAGAGATATTGATCTTGCAGTTTCCGCTGCACGCAGGGCATTTGATCAAGGGCCATGGCCTAGAATGACTGCTTATGAAAGATCAAAGATAATTTTGCGATTTGCCGATTTGGTTGAAAAGCATGCAGATGACGTTGCAGCGCTCGAAACTTGGGACAATGGGAAAACATACGAACAGTCAGCCAAACTGGAAGTCCCAATGTTTGTACGCCTCTTCCGATACTATGCCGGATGGGCCGATAAGATTCATGGACTCACAGTTCCAGCTGATGGCTCGTATCATGTGCAGACCTTGCACGAACCAATTGGTGTTGCGGGTCAGATTATTCCATGGAACTTTCCACTGCTTATGTTTGCTTGGAAGGTTGGTCCAGCATTAGCATGTGGGAATACTATTGTTCTGAAGACAGCCGAGCAGACACCTTTGTCTGCTCTCTATGTGGCTAAGCTATTGCATGAGGCTGGACTTCCAGAGGGCGTTCTCAATATTGTTTCCGGTTATGGGCCCACTGCTGGTGCTGCTCTTGCCAGTCACATGGAAGTTGATAAGCTTGCTTTTACTGGATCAACCGAAACAGGGAAGATAGTACTTGAACTAGCTGCAAAAAGCAATCTGAAGCCAGTAACGTTGGAGCTTGGTGGAAAATCCCCTTTCATTGTATGTGAGGATGCTGATGTGGATAAGGCTGTCGAGATGGCACACTTTGCTCTCTTCTTCAACCAGGGACAATGCTGCTGTGCTGGTTCTCGTACTTTTGTTCATGAAAAATTGTATGATGAGTTTCGAGAAAAAGCAAGGAAACGGGCTGCAAACCGTGTTGTTGGTGATCCATTCCTAGGCGGAATTGAGCAAGGTCCTCAGGTCGATGGCGAACAATTCAAAAAGATTTTGAGATATATAAAATCTGGGATTGAAGGTGGAGCCACTCTCGAAGCTGGAGGAGAGAGGTTTGGCTCCAAGGGTTACTATGTCCAGCCCACAGTTTTCTCGAATGTCAAGGATGACATGGCAATTGCACAGGAGGAGATTTTTGGTCCTGTGCAGACAATCTTGAAATACAAAGAGGTTGAGGAGGTGATAAGGAGGGCAAATGCTAGTCGCTATGGGCTGGCCGCTGGTGTGTTTACTCAAAATATAGACACAGCCAACAGGCTGACCCGTGCGCTGAGAGTTGGGTCTGTGTGGATCAATTGCTTCGATATATTTGATGCTGCAATTCCTTTTGGTGGGTACAAGATGAGTGGACATGGGCGAGAAAAGGGTATTTACAGCCTCAGCAATTACCTGCAAGTGAAGGCTGTTGTCACTCCTTTGGACAACCCTGCTTGGCTCTAG 1533 46.9 MRRRPRTTSKYSTAAAVEDPINPSVKVNYTQLLINGQFVDSVSGKTFPTLDPRTGEVIANVAEGDARDIDLAVSAARRAFDQGPWPRMTAYERSKIILRFADLVEKHADDVAALETWDNGKTYEQSAKLEVPMFVRLFRYYAGWADKIHGLTVPADGSYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVAKLLHEAGLPEGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTETGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVEMAHFALFFNQGQCCCAGSRTFVHEKLYDEFREKARKRAANRVVGDPFLGGIEQGPQVDGEQFKKILRYIKSGIEGGATLEAGGERFGSKGYYVQPTVFSNVKDDMAIAQEEIFGPVQTILKYKEVEEVIRRANASRYGLAAGVFTQNIDTANRLTRALRVGSVWINCFDIFDAAIPFGGYKMSGHGREKGIYSLSNYLQVKAVVTPLDNPAWL 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 97067790 97071402 - Tan0011058.2 Tan02g2878 745504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2878 510 FunFam Aldehyde dehydrogenase, putative 472 498 - -
Tan02g2878 510 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 304 315 IPR016160 GO:0016491(InterPro)
Tan02g2878 510 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 280 469 IPR016163 GO:0016620(InterPro)
Tan02g2878 510 FunFam Mitochondrial aldehyde dehydrogenase 2 282 471 - -
Tan02g2878 510 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 276 283 IPR029510 GO:0016491(InterPro)
Tan02g2878 510 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 34 297 - -
Tan02g2878 510 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 34 498 IPR016162 GO:0016491(InterPro)
Tan02g2878 510 SUPERFAMILY ALDH-like 26 503 IPR016161 GO:0016491(InterPro)
Tan02g2878 510 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 24 502 - GO:0004029(PANTHER)
Tan02g2878 510 Pfam Aldehyde dehydrogenase family 38 500 IPR015590 GO:0016491(InterPro)
Tan02g2878 510 CDD ALDH_F2BC 27 502 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2878 Tan-Chr2:97067790 Tan09g2233 Tan-Chr9:72300960 4.80E-250 dispersed
Tan02g2877 Tan-Chr2:97067790 Tan02g2878 Tan-Chr2:97067790 6.30E-301 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2878 K00128 - csv:101202756 956.822