Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g2878 | ATGAGGAGGAGGCCCAGAACAACTAGCAAATATAGCACTGCGGCTGCTGTTGAAGACCCGATTAATCCATCTGTGAAAGTAAATTACACCCAGCTGCTGATCAACGGACAATTTGTGGATTCAGTCTCAGGAAAAACGTTTCCTACACTGGACCCTAGGACTGGAGAAGTCATTGCGAATGTTGCTGAAGGTGACGCCAGAGATATTGATCTTGCAGTTTCCGCTGCACGCAGGGCATTTGATCAAGGGCCATGGCCTAGAATGACTGCTTATGAAAGATCAAAGATAATTTTGCGATTTGCCGATTTGGTTGAAAAGCATGCAGATGACGTTGCAGCGCTCGAAACTTGGGACAATGGGAAAACATACGAACAGTCAGCCAAACTGGAAGTCCCAATGTTTGTACGCCTCTTCCGATACTATGCCGGATGGGCCGATAAGATTCATGGACTCACAGTTCCAGCTGATGGCTCGTATCATGTGCAGACCTTGCACGAACCAATTGGTGTTGCGGGTCAGATTATTCCATGGAACTTTCCACTGCTTATGTTTGCTTGGAAGGTTGGTCCAGCATTAGCATGTGGGAATACTATTGTTCTGAAGACAGCCGAGCAGACACCTTTGTCTGCTCTCTATGTGGCTAAGCTATTGCATGAGGCTGGACTTCCAGAGGGCGTTCTCAATATTGTTTCCGGTTATGGGCCCACTGCTGGTGCTGCTCTTGCCAGTCACATGGAAGTTGATAAGCTTGCTTTTACTGGATCAACCGAAACAGGGAAGATAGTACTTGAACTAGCTGCAAAAAGCAATCTGAAGCCAGTAACGTTGGAGCTTGGTGGAAAATCCCCTTTCATTGTATGTGAGGATGCTGATGTGGATAAGGCTGTCGAGATGGCACACTTTGCTCTCTTCTTCAACCAGGGACAATGCTGCTGTGCTGGTTCTCGTACTTTTGTTCATGAAAAATTGTATGATGAGTTTCGAGAAAAAGCAAGGAAACGGGCTGCAAACCGTGTTGTTGGTGATCCATTCCTAGGCGGAATTGAGCAAGGTCCTCAGGTCGATGGCGAACAATTCAAAAAGATTTTGAGATATATAAAATCTGGGATTGAAGGTGGAGCCACTCTCGAAGCTGGAGGAGAGAGGTTTGGCTCCAAGGGTTACTATGTCCAGCCCACAGTTTTCTCGAATGTCAAGGATGACATGGCAATTGCACAGGAGGAGATTTTTGGTCCTGTGCAGACAATCTTGAAATACAAAGAGGTTGAGGAGGTGATAAGGAGGGCAAATGCTAGTCGCTATGGGCTGGCCGCTGGTGTGTTTACTCAAAATATAGACACAGCCAACAGGCTGACCCGTGCGCTGAGAGTTGGGTCTGTGTGGATCAATTGCTTCGATATATTTGATGCTGCAATTCCTTTTGGTGGGTACAAGATGAGTGGACATGGGCGAGAAAAGGGTATTTACAGCCTCAGCAATTACCTGCAAGTGAAGGCTGTTGTCACTCCTTTGGACAACCCTGCTTGGCTCTAG | 1533 | 46.9 | MRRRPRTTSKYSTAAAVEDPINPSVKVNYTQLLINGQFVDSVSGKTFPTLDPRTGEVIANVAEGDARDIDLAVSAARRAFDQGPWPRMTAYERSKIILRFADLVEKHADDVAALETWDNGKTYEQSAKLEVPMFVRLFRYYAGWADKIHGLTVPADGSYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVAKLLHEAGLPEGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTETGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVEMAHFALFFNQGQCCCAGSRTFVHEKLYDEFREKARKRAANRVVGDPFLGGIEQGPQVDGEQFKKILRYIKSGIEGGATLEAGGERFGSKGYYVQPTVFSNVKDDMAIAQEEIFGPVQTILKYKEVEEVIRRANASRYGLAAGVFTQNIDTANRLTRALRVGSVWINCFDIFDAAIPFGGYKMSGHGREKGIYSLSNYLQVKAVVTPLDNPAWL | 510 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 97067790 | 97071402 | - | Tan0011058.2 | Tan02g2878 | 745504 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g2878 | 510 | FunFam | Aldehyde dehydrogenase, putative | 472 | 498 | - | - | |
Tan02g2878 | 510 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 304 | 315 | IPR016160 | GO:0016491(InterPro) | |
Tan02g2878 | 510 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 280 | 469 | IPR016163 | GO:0016620(InterPro) | |
Tan02g2878 | 510 | FunFam | Mitochondrial aldehyde dehydrogenase 2 | 282 | 471 | - | - | |
Tan02g2878 | 510 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 276 | 283 | IPR029510 | GO:0016491(InterPro) | |
Tan02g2878 | 510 | FunFam | ALD5p Mitochondrial aldehyde dehydrogenase | 34 | 297 | - | - | |
Tan02g2878 | 510 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 34 | 498 | IPR016162 | GO:0016491(InterPro) | |
Tan02g2878 | 510 | SUPERFAMILY | ALDH-like | 26 | 503 | IPR016161 | GO:0016491(InterPro) | |
Tan02g2878 | 510 | PANTHER | ALDEHYDE DEHYDROGENASE-RELATED | 24 | 502 | - | GO:0004029(PANTHER) | |
Tan02g2878 | 510 | Pfam | Aldehyde dehydrogenase family | 38 | 500 | IPR015590 | GO:0016491(InterPro) | |
Tan02g2878 | 510 | CDD | ALDH_F2BC | 27 | 502 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g2878 | Tan-Chr2:97067790 | Tan09g2233 | Tan-Chr9:72300960 | 4.80E-250 | dispersed | |
Tan02g2877 | Tan-Chr2:97067790 | Tan02g2878 | Tan-Chr2:97067790 | 6.30E-301 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g2878 | K00128 | - | csv:101202756 | 956.822 |