Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0044 ATGTCGATGTCGATGAATTTAGTTAGAGTTCTCTTGTGTGTCGGATTGAGTTTAATGTTGAAATTGGGAGGTGTAAATGGGTTGAGTATGGGATATTACTTGATGAGTTGTCCGTTCGTAGATCCAATTGTGAAGAATACTGTGAACAGAGCTCTTCAAAATGATCCCACCCTAGCAGCTGCCCTCATTCGAATGCATTTTCACGACTGTTTTGTTGAGGGGTGTGATGGGTCGGTGCTCATCGATTCAACGCAAGACAACACTGCAGAAAAGGACTCTCCTGCCAACTTCAGCCTACGAGGTTACGAGCTTATTGATGATATTAAGGAGCAACTAGAGAACCAATGCCCTGGTGTTGTTTCTTGTGCCGACATTATTGCTATGGCCGCTAGAGATGCAGTCTTTTGGGCTGGAGGTCCGTATTATGACATACCGAAAGGAAGGAAGGATGGGACCAGGTCTAGAATCGAAGACACCGCCAATTTGCCTTCGCCTTTCTTCAATGCATCTGAGCTTATTAATACCTTCGCTCGGCGTGGCTTTACTGTTCAGCAAATGGTCGCACTTTCAGGGGCTCATACATTGGGAGTGGCAAGATGCGTATCCTTCAAAGGAAGACTGAACGGGAACGATCCCCTTCTGAGTCCCAACTTCGGGAGAACACTGTCAAGAACATGCAGCAATGGAGACAACGCAATACAAACATTCGACGCGACAGCCGACAGCTTCGACAACGTCTATTACAACGCGCTGTCGAGAGGAGCGGGAGTTCTGTTTTCAGACCAGAGCTTGTACGCTAGCCCACGTACGAGGGGCATTGTCAATGCCTACGCCATGAACCAAGCGCTGTTCTTCCTGGACTTTCAGCAGGCCTTCATCAAAATGGGCTTGCTTGATGTTAAGGAAGGTTACAGAGGCCAAGTCCGCCGCAACTGCCGTACGCTTAATTGA 951 47.95 MSMSMNLVRVLLCVGLSLMLKLGGVNGLSMGYYLMSCPFVDPIVKNTVNRALQNDPTLAAALIRMHFHDCFVEGCDGSVLIDSTQDNTAEKDSPANFSLRGYELIDDIKEQLENQCPGVVSCADIIAMAARDAVFWAGGPYYDIPKGRKDGTRSRIEDTANLPSPFFNASELINTFARRGFTVQQMVALSGAHTLGVARCVSFKGRLNGNDPLLSPNFGRTLSRTCSNGDNAIQTFDATADSFDNVYYNALSRGAGVLFSDQSLYASPRTRGIVNAYAMNQALFFLDFQQAFIKMGLLDVKEGYRGQVRRNCRTLN 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5475765 5481873 - Tan0011561.1 Tan03g0044 745548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0044 316 FunFam Peroxidase 31 165 - -
Tan03g0044 316 PANTHER PEROXIDASE 25-RELATED 19 312 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Tan03g0044 316 Pfam Peroxidase 44 279 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0044 316 ProSiteProfiles Plant heme peroxidase family profile. 27 316 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0044 316 SUPERFAMILY Heme-dependent peroxidases 27 316 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0044 316 CDD secretory_peroxidase 27 313 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan03g0044 316 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601(InterPro)
Tan03g0044 316 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0044 316 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0044 316 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0044 316 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0044 316 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0044 316 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0044 316 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0044 316 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0044 316 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0044 316 FunFam Peroxidase 163 295 - -
Tan03g0044 316 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0044 316 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0044 316 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0044 316 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0044 316 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0044 316 Gene3D - 31 316 - -
Tan03g0044 316 Gene3D Peroxidase, domain 2 163 295 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2827 Tan-Chr2:96566324 Tan03g0044 Tan-Chr3:5475765 1.50E-71 dispersed
Tan03g0044 Tan-Chr3:5475765 Tan06g0677 Tan-Chr6:5111292 2.60E-68 dispersed
Tan03g0044 Tan-Chr3:5475765 Tan03g0045 Tan-Chr3:5475765 2.50E-108 tandem
Tan03g0044 Tan-Chr3:5475765 Tan04g1752 Tan-Chr4:46665973 1.40E-53 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0044 K00430 - csv:101202852 555.058