Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0045 ATGTCGATGTCGATGAATTTAGTTAGAGTTCTCTTGTGTGTCGGATTGAGTTTAATGTTGAAATTGGGAGGTGTAAATGGGTTGAGTATGGGATATTACTTGATGAGTTGTCCGTTCGTAGATCCAATTGTGAAGAATACTGTGAACAGAGCTCTTCAAAATGATCCCACCCTAGCAGCTGCCCTCATTCGAATGCATTTTCACGACTGTTTTGTTGAGGGGTGTGATGGGTCGGTGCTCATCGATTCAACGCAAGACAACACTGCAGAAAAGGACTCTCCTGCCAACTTCAGCCTACGAGGTTACGAGCTTATTGATGATATTAAGGAGCAACTAGAGAACCAATGCCCTGGTGTTGTTTCTTGTGCCGACATTATTGCTATGGCCGCTAGAGATGCAGTCTTTTGGGCTGGAGGTCCGTATTATGACATACCGAAAGGAAGGAAGGATGGGACCAGGTCTAGAATCGAAGACACCGCCAATTTGCCTTCGCCTTTCTTCAATGCATCTGAGCTTATTAATACCTTCGCTCGGCGTGGCTTTACTGTTCAGCAAATGGTCGCACTTTCAGGTACATACATCTTAAATTTACCATCACAGGTGAAATTTACTTCCAATTTGGTTCTAAGTAATTTTCAAATTTTCAATGTAGAATATATACTTCTGTTAAATCTCTCTCAAAACATTTCTGAGAAAATCATCCGTTTGGTTGGTAAGTTTATGCAGTGGCGGAGGGGAACCAAAATTTTATTTAAAACTGTCCATATTTGA 771 41.5 MSMSMNLVRVLLCVGLSLMLKLGGVNGLSMGYYLMSCPFVDPIVKNTVNRALQNDPTLAAALIRMHFHDCFVEGCDGSVLIDSTQDNTAEKDSPANFSLRGYELIDDIKEQLENQCPGVVSCADIIAMAARDAVFWAGGPYYDIPKGRKDGTRSRIEDTANLPSPFFNASELINTFARRGFTVQQMVALSGTYILNLPSQVKFTSNLVLSNFQIFNVEYILLLNLSQNISEKIIRLVGKFMQWRRGTKILFKTVHI 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5475765 5481873 - Tan0011561.2 Tan03g0045 745549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0045 256 PANTHER PEROXIDASE 25-RELATED 19 203 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Tan03g0045 256 FunFam Peroxidase 31 166 - -
Tan03g0045 256 Gene3D Peroxidase, domain 2 163 206 - -
Tan03g0045 256 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601(InterPro)
Tan03g0045 256 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0045 256 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0045 256 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0045 256 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0045 256 Gene3D - 31 162 - -
Tan03g0045 256 SUPERFAMILY Heme-dependent peroxidases 27 192 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0045 256 ProSiteProfiles Plant heme peroxidase family profile. 27 223 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0045 256 Pfam Peroxidase 44 196 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0045 256 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0045 256 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0045 256 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0045 256 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0045 256 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0045 256 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g0045 256 CDD secretory_peroxidase 27 191 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0045 Tan-Chr3:5475765 Tan03g2114 Tan-Chr3:75970645 8.80E-51 dispersed
Tan03g0044 Tan-Chr3:5475765 Tan03g0045 Tan-Chr3:5475765 2.50E-108 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0045 K00430 - csv:101202852 334.724