Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0174 ATGTTGGATTTTATTCTTCGTCGGAATCTGATCGGAGATCGCGATTTGCTGCAGCCATTAATGTGGTCCAAGTCCGATAGTAAACCCGACGGATCTGAGATGTTTAGCAACTCATCGAAAGCGGAAAACGATTTTCACGGAGGAATGAACGTTAACGCACCAAATTTCGTGAAGAATCCTCCGGATTCTCTGAGAAGAATCGATCAAATCGCGAAGAACGGCGTAAATTCGGGGAATCAGACGGCGACGGTGAACTACGAGAATATTCAAGCGGGAACGAACATGAAGAACAACAACTCTGGTTTCAATCCGGCGAAGAGCGGCGGAGATAGCGGAGGAGGAAATAATTACCGGTGCGAGAACATGGAGACGCCGGGAGTGGTGATTAAACCGCACACAGGCGGGGATGTGCGATGGGACGCAGTGAATATGGTATCGAAAGGAGGACAGTTGAATCTGAGCCATTTCAGGCTTTTGAAGAGGCTTGGTTATGGTGATATCGGAAGTGTTTATCTGGTGGAATTGAGAGGAACTGATACGTTTTTCGCCATGAAAGTGATGGATAAAGCTTCATTGGCGAGTAGGAATAAGCTTCTAAGGGCGCAGACAGAGAGGGAGATTTTAGGGCTATTGGATCATCCATTTTTGCCAACTCTGTATTCATATTTTGAAACTGATAAGTTCTATTGCTTGGTTATGGAGTTTTGTAGCGGTGGTAATCTTCATTCTCTTCGTCAAAAGCAACCTAACAAGTATTTTACAGAAGAAGCTGCCAGGTTCTATGCATCAGAAGTTCTATTAGCACTCGAATATCTTCACATGTTAGGCATAGTCTACAGAGATTTGAAACCAGAGAACCTGTTAATCCGAGACGAAGGCCACATCATGCTCTCCGATTTCGACCTCTCTCTCCGCTGCTCCGTCAGTCCTACCCTCGTCAAATCCTCCTCCGTCAACGTCAACGGCAGCTCCACCACCGGAAATGCCGGCAGCAATGGCGGCGGCAGTGGCGGTATCCTCGACGACGAATTCGCCGTCCACGGCTGTATGCAGCCTTCCAACTTCCTCCCTCGCATCCTCCCTTCCAAGAAGAATCGCAAGTCCAAATCTGACTTTGGCCTCTTCGTCGGCGGCGCCCTACCGGAACTCATGGCCGAGCCGACCAATGTCAGATCCATGTCCTTCGTCGGCACGCACGAGTATTTGGCGCCGGAGATCATCCAAGGCGAAGGCCATGGCAGCGCCGTTGACTGGTGGACCTTCGGGATCTTCCTCTATGAGCTTCTTCATGGAACGACGCCGTTTAAAGGATCTGGAAACAGAGCTACTCTGTTCAATGTCGTCGGACAGCCGCTCAGATTCCCGGACACGCCGCAGGTGAGTCTTGCGGCGAGGGATCTCATCAGAGGCCTTCTTGTGAAGGAACCACAAAAGAGAATCGCGTATAGAAGAGGCGCTACTGAGATTAAACAGCATCCGTTCTTCGATGGAGTCAATTGGGCGTTGGTCAGAAGCGCTATGCCGCCGCACGTGCCGGAGCCGGTCGACTTCTCGCAGTTCGCTAGCAAGAAAAGCGGCGGCAGCGGCAGTTGCGGTGCCGGCGGAGTGGTGGAAGAGAAGAAGGCGGTCGAAGTAGCCGCCGCGGCAGCGGCGGCGGCGGCGGCCGGGGAGAATCCTTCTTCGCCTTCTACTGGTAGCGATTCCAATTATGTGGATTTTGAGTACTTCTAG 1731 51.36 MLDFILRRNLIGDRDLLQPLMWSKSDSKPDGSEMFSNSSKAENDFHGGMNVNAPNFVKNPPDSLRRIDQIAKNGVNSGNQTATVNYENIQAGTNMKNNNSGFNPAKSGGDSGGGNNYRCENMETPGVVIKPHTGGDVRWDAVNMVSKGGQLNLSHFRLLKRLGYGDIGSVYLVELRGTDTFFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLIRDEGHIMLSDFDLSLRCSVSPTLVKSSSVNVNGSSTTGNAGSNGGGSGGILDDEFAVHGCMQPSNFLPRILPSKKNRKSKSDFGLFVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIQGEGHGSAVDWWTFGIFLYELLHGTTPFKGSGNRATLFNVVGQPLRFPDTPQVSLAARDLIRGLLVKEPQKRIAYRRGATEIKQHPFFDGVNWALVRSAMPPHVPEPVDFSQFASKKSGGSGSCGAGGVVEEKKAVEVAAAAAAAAAAGENPSSPSTGSDSNYVDFEYF 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29022825 29025761 - Tan0006015.1 Tan03g0174 745678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0174 576 Gene3D Phosphorylase Kinase; domain 1 154 239 - -
Tan03g0174 576 FunFam serine/threonine-protein kinase D6PK-like 240 307 - -
Tan03g0174 576 Gene3D Transferase(Phosphotransferase) domain 1 371 513 - -
Tan03g0174 576 Pfam Protein kinase domain 389 495 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0174 576 Pfam Protein kinase domain 157 309 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0174 576 MobiDBLite consensus disorder prediction 552 576 - -
Tan03g0174 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g0174 576 SMART serkin_6 156 495 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0174 576 CDD STKc_phototropin_like 154 516 - -
Tan03g0174 576 PANTHER FLIPPASE KINASE 1-RELATED 99 518 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan03g0174 576 SUPERFAMILY Protein kinase-like (PK-like) 153 520 IPR011009 -
Tan03g0174 576 Gene3D Transferase(Phosphotransferase) domain 1 240 309 - -
Tan03g0174 576 ProSiteProfiles Protein kinase domain profile. 156 495 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0174 576 FunFam Serine/threonine-protein kinase AGC1-5 154 239 - -
Tan03g0174 576 FunFam Serine/threonine-protein kinase AGC1-7 388 513 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0174 Tan-Chr3:29022825 Tan03g2209 Tan-Chr3:76562627 9.30E-149 dispersed
Tan03g0174 Tan-Chr3:29022825 Tan05g1838 Tan-Chr5:62340206 8.40E-150 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67265 PF00069 Pkinase 2.10E-37 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0174 - - - 0.0