Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g0174 | ATGTTGGATTTTATTCTTCGTCGGAATCTGATCGGAGATCGCGATTTGCTGCAGCCATTAATGTGGTCCAAGTCCGATAGTAAACCCGACGGATCTGAGATGTTTAGCAACTCATCGAAAGCGGAAAACGATTTTCACGGAGGAATGAACGTTAACGCACCAAATTTCGTGAAGAATCCTCCGGATTCTCTGAGAAGAATCGATCAAATCGCGAAGAACGGCGTAAATTCGGGGAATCAGACGGCGACGGTGAACTACGAGAATATTCAAGCGGGAACGAACATGAAGAACAACAACTCTGGTTTCAATCCGGCGAAGAGCGGCGGAGATAGCGGAGGAGGAAATAATTACCGGTGCGAGAACATGGAGACGCCGGGAGTGGTGATTAAACCGCACACAGGCGGGGATGTGCGATGGGACGCAGTGAATATGGTATCGAAAGGAGGACAGTTGAATCTGAGCCATTTCAGGCTTTTGAAGAGGCTTGGTTATGGTGATATCGGAAGTGTTTATCTGGTGGAATTGAGAGGAACTGATACGTTTTTCGCCATGAAAGTGATGGATAAAGCTTCATTGGCGAGTAGGAATAAGCTTCTAAGGGCGCAGACAGAGAGGGAGATTTTAGGGCTATTGGATCATCCATTTTTGCCAACTCTGTATTCATATTTTGAAACTGATAAGTTCTATTGCTTGGTTATGGAGTTTTGTAGCGGTGGTAATCTTCATTCTCTTCGTCAAAAGCAACCTAACAAGTATTTTACAGAAGAAGCTGCCAGGTTCTATGCATCAGAAGTTCTATTAGCACTCGAATATCTTCACATGTTAGGCATAGTCTACAGAGATTTGAAACCAGAGAACCTGTTAATCCGAGACGAAGGCCACATCATGCTCTCCGATTTCGACCTCTCTCTCCGCTGCTCCGTCAGTCCTACCCTCGTCAAATCCTCCTCCGTCAACGTCAACGGCAGCTCCACCACCGGAAATGCCGGCAGCAATGGCGGCGGCAGTGGCGGTATCCTCGACGACGAATTCGCCGTCCACGGCTGTATGCAGCCTTCCAACTTCCTCCCTCGCATCCTCCCTTCCAAGAAGAATCGCAAGTCCAAATCTGACTTTGGCCTCTTCGTCGGCGGCGCCCTACCGGAACTCATGGCCGAGCCGACCAATGTCAGATCCATGTCCTTCGTCGGCACGCACGAGTATTTGGCGCCGGAGATCATCCAAGGCGAAGGCCATGGCAGCGCCGTTGACTGGTGGACCTTCGGGATCTTCCTCTATGAGCTTCTTCATGGAACGACGCCGTTTAAAGGATCTGGAAACAGAGCTACTCTGTTCAATGTCGTCGGACAGCCGCTCAGATTCCCGGACACGCCGCAGGTGAGTCTTGCGGCGAGGGATCTCATCAGAGGCCTTCTTGTGAAGGAACCACAAAAGAGAATCGCGTATAGAAGAGGCGCTACTGAGATTAAACAGCATCCGTTCTTCGATGGAGTCAATTGGGCGTTGGTCAGAAGCGCTATGCCGCCGCACGTGCCGGAGCCGGTCGACTTCTCGCAGTTCGCTAGCAAGAAAAGCGGCGGCAGCGGCAGTTGCGGTGCCGGCGGAGTGGTGGAAGAGAAGAAGGCGGTCGAAGTAGCCGCCGCGGCAGCGGCGGCGGCGGCGGCCGGGGAGAATCCTTCTTCGCCTTCTACTGGTAGCGATTCCAATTATGTGGATTTTGAGTACTTCTAG | 1731 | 51.36 | MLDFILRRNLIGDRDLLQPLMWSKSDSKPDGSEMFSNSSKAENDFHGGMNVNAPNFVKNPPDSLRRIDQIAKNGVNSGNQTATVNYENIQAGTNMKNNNSGFNPAKSGGDSGGGNNYRCENMETPGVVIKPHTGGDVRWDAVNMVSKGGQLNLSHFRLLKRLGYGDIGSVYLVELRGTDTFFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLIRDEGHIMLSDFDLSLRCSVSPTLVKSSSVNVNGSSTTGNAGSNGGGSGGILDDEFAVHGCMQPSNFLPRILPSKKNRKSKSDFGLFVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIQGEGHGSAVDWWTFGIFLYELLHGTTPFKGSGNRATLFNVVGQPLRFPDTPQVSLAARDLIRGLLVKEPQKRIAYRRGATEIKQHPFFDGVNWALVRSAMPPHVPEPVDFSQFASKKSGGSGSCGAGGVVEEKKAVEVAAAAAAAAAAGENPSSPSTGSDSNYVDFEYF | 576 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 29022825 | 29025761 | - | Tan0006015.1 | Tan03g0174 | 745678 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g0174 | 576 | Gene3D | Phosphorylase Kinase; domain 1 | 154 | 239 | - | - | |
Tan03g0174 | 576 | FunFam | serine/threonine-protein kinase D6PK-like | 240 | 307 | - | - | |
Tan03g0174 | 576 | Gene3D | Transferase(Phosphotransferase) domain 1 | 371 | 513 | - | - | |
Tan03g0174 | 576 | Pfam | Protein kinase domain | 389 | 495 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan03g0174 | 576 | Pfam | Protein kinase domain | 157 | 309 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan03g0174 | 576 | MobiDBLite | consensus disorder prediction | 552 | 576 | - | - | |
Tan03g0174 | 576 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 277 | 289 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan03g0174 | 576 | SMART | serkin_6 | 156 | 495 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan03g0174 | 576 | CDD | STKc_phototropin_like | 154 | 516 | - | - | |
Tan03g0174 | 576 | PANTHER | FLIPPASE KINASE 1-RELATED | 99 | 518 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Tan03g0174 | 576 | SUPERFAMILY | Protein kinase-like (PK-like) | 153 | 520 | IPR011009 | - | |
Tan03g0174 | 576 | Gene3D | Transferase(Phosphotransferase) domain 1 | 240 | 309 | - | - | |
Tan03g0174 | 576 | ProSiteProfiles | Protein kinase domain profile. | 156 | 495 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan03g0174 | 576 | FunFam | Serine/threonine-protein kinase AGC1-5 | 154 | 239 | - | - | |
Tan03g0174 | 576 | FunFam | Serine/threonine-protein kinase AGC1-7 | 388 | 513 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g0174 | Tan-Chr3:29022825 | Tan03g2209 | Tan-Chr3:76562627 | 9.30E-149 | dispersed | |
Tan03g0174 | Tan-Chr3:29022825 | Tan05g1838 | Tan-Chr5:62340206 | 8.40E-150 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67265 | PF00069 | Pkinase | 2.10E-37 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g0174 | - | - | - | 0.0 |