Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan03g0217 | ATGACAAAGTCTCCTCCGATTAAGGAGAGGCGAAACCAACTTATTCAAAAAACCCACAAAGAACAAAAACATCAGAAGCGGATGGTTGATGAAGATGAGGAGGAGAACTCTAAAATCGAGACTTCATTGTTGCTAAACCATAAAAGCCCCGAGATTGAAAGCAGGCTTTATTTTTCTTCCGGACCCTCCAAAAGTTCCTTCACTAATGAGTCAAATGTGGAAATCGATAAACCAATTTTTCAATTTGAGTCTTCAAAAGAAATCCAAGTTCACCATGATAGCAGAGCCACTGCAACTCTAGAAACAGAAACTGAGTTCTCAAGAGATGCACGAGTCATTCGTGAGAGAGTTTTGAAGCAAGCTGGGGAGGCTTTGAAGGGTAAAGGCAAGAGTTCTGGGGGTGAGAAGTTGTATAAAGGGGCCAATGCCTATGTGGATTACAAGGCTTGCTTCATAATGGAACATACAATTTCAAGTGAAAAAGCTGGTGGAGCACATGGGCCACTTAGAGCTTCTGCTCATATAAGAGCTTCAGCAAGATTTGATTATCAGCCTAATATTTGCAAGGATTATAAAGAGACTGGTTACTGTGGGGATTACAAGTCTAGGTGGCAGTTGGAAAAGGAATGGGAAGAAGTAGAGGAAGCAAGGAAGAGAAAGTTAGCTTTGGGATGTCTAAACGAGAGTGATGAAGATGATGAAGATGCCTTGCCCTTTGCTTGTTTTATTTGTCGTGAGCCATTTCACCATGCAAAGAATAAGAAATGCTTCGTTTGCAATCAACCAACGGTTGGAATCTTTAACACGGCTCATGAGATAAGGAAAAAGATGACACAGAGCAAATAA | 846 | 41.02 | MTKSPPIKERRNQLIQKTHKEQKHQKRMVDEDEEENSKIETSLLLNHKSPEIESRLYFSSGPSKSSFTNESNVEIDKPIFQFESSKEIQVHHDSRATATLETETEFSRDARVIRERVLKQAGEALKGKGKSSGGEKLYKGANAYVDYKACFIMEHTISSEKAGGAHGPLRASAHIRASARFDYQPNICKDYKETGYCGDYKSRWQLEKEWEEVEEARKRKLALGCLNESDEDDEDALPFACFICREPFHHAKNKKCFVCNQPTVGIFNTAHEIRKKMTQSK | 281 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 32549219 | 32552741 | - | Tan0011112.1 | Tan03g0217 | 745721 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan03g0217 | 281 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
| Tan03g0217 | 281 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
| Tan03g0217 | 281 | PANTHER | ZINC FINGER PROTEIN 183 | 14 | 280 | IPR039971 | GO:0005684(PANTHER)|GO:0034247(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan03g0217 | Tan-Chr3:32549219 | Tan10g1898 | Tan-Chr10:60696842 | 5.20E-121 | dispersed | |
| Tan03g0213 | Tan-Chr3:32490760 | Tan03g0217 | Tan-Chr3:32549219 | 7.50E-124 | proximal | |
| Tan03g0217 | Tan-Chr3:32549219 | Tan03g0218 | Tan-Chr3:32557024 | 1.70E-84 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan03g0217 | K13127 | - | csv:101221334 | 410.609 |