Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0284 ATGGCTTCCCCCTTCAAACCTCCATTGTTGCTCTCTTTAGCCTTCGCTTTCTTCGTTTTGGGTTTTTCTTCATCTGAGGAATCGACCCTTTTGACCTTCAAAGCCTCTATTAAAGATTTAACTAACTCTCTCTCGAACTGGGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGACCCATTTCTGTAACTGGACTGGAATTTCTTGTGTGAGCTCTTCTTCCCCTTCTTTGCTTTCGGTTTCCGCTATTGATCTTCAGGGTTTGAACCTCTCTGGTGAAATTTCATCTTCCATTTGTGAGCTCCCTCGTTTGGCTCATCTTAATCTTGCGGATAATCAGTTCAATCAGCCGATTCCTCTTCATCTCTCGCAGTGCAGCTCATTGGAGACTTTGAATCTGAGCAATAATCTCATTTGGGGGACGATCCCGGATCAGATTTCTCTGTTTGGTTCTTTGAGAGTGCTTGATTTTGGGAAGAATCATATTGAAGGGAAGATTCCTGAGGGCATTGCGGCTTTGAAGAGTCTTCAAATTCTGAATCTGAGAAGCAACTTGATTTCTGGTAGAGTTCCTTCTGTTGTTTTTCATAATCTTACTGACCTTCTCGTTGTTGATTTGTCTGAAAATTCTTATCTGTTGAGTGATATTCCTAGTGAGATTGGGAAGCTTGAGAAGCTAGAGGAGCTATGGCTTCAAAGCTCTGGTTTCTATGGTGAAATCCCTTCTTCTTTGTTGGGTTTGAGAAGTTTGACTGTTTTGGATCTTTCTCAGAACAATCTCACTGGGAAACTCCCTGAAATGTTGGGTTCTTCTTTGAAGAATTTGGTGTCTTTTGATGTTTCTGAGAATAAGCTTGTGGGGTCTTTTCCAAATGGATTTTGTAGTGGAAAAGGCCTTGTGAGCCTTAGTCTTCATACCAATTTTTTCACTGGGACTTTGCCTAATTCCTTGAACCAATGCTTGAATCTTGAGAGGTTTCAAGTTCAGAACAATGGGTTTTCTGGGGATTTTCCTAAAACCTTGTGGTCTTTGCCTATGATTAAACTCATCAGAGCTGAAAACAATGGTTTCTCTGGTGAAGTTCCAGAGTCTATATCAATGGCTGCTCATCTGGAGCAAGTTCAGCTTGATAACAACAGTTTTTCAAGTAAGATACCTCGTGGTCTCGGGTCGATTCGGAGCTTATACCGATTCTCTGCGTCGCTCAACCAACTTTATGGTGAATTGCCACCAAATTTCTGTGATTCGCCATTGATGAGTATCATTAATCTGTCCCACAATTCTCTTTCGGGACAGATTCCCGAGCTGAAAAACTGCAAGAAACTTGTCTCTCTGTCCTTAGCAGGCAATAGTCTTACTGGAGAAATACCTACTTCCCTTGCAGATCTACCTGTGTTAACTTATCTTGATCTTTCTGATAACAATCTCACTGGTTCGATCCCTCGAGGACTTGAAAACTTAAAGCTTGCACTTTTTAATGTTTCGTTCAATCAGCTATCAGGCGCTGTTCCATTCTCTTTGATTTCGGGGCTACCTGCTTCATTCCTGCAAGGAAATCCTGATCTTTGTGGCCCTGGTTTGCAAACTCCTTGTTCTCAAGGCCATCAAACAAACCATATGTCTGGACTTAACAGAATGACATGTGCCCTCATCTCTATAGCTTGTGTTTTAGGAGTTATGAGCTTAGCTGCCGGTTTCTTTCTGTATTACCGATCCTTCAAACCGAAATCCCATGTCGATAACTGGCACTCGGTCTACTTCTACCCTCTTAGAATCAGTGAACATGAATTGATCATGGGGATGAATGAGAAAACTGCACAAGGATGTGGAGGAGCATTTGGCCAAGTGTTCATTCTAAGTTTACCGAGTCGTGAACTGATTGCCGTAAAGAAACTGGTTAACTTCGGTAGTCGTTCGTGGAAGTCATTGAAAGCCGAGGTCAAGACATTGGCCAAGATCAGGCACAAGAACATCATCAAAATTCTGGGGTTTTGCCACTCTGATGATGCCATTTTTCTGATCTATGAATTCTTACACAAAGGAAGTTTGGCTGACTTGATATGCAGAAATGATTCTTGTCTGAATTGGAATGTGAGGCTGAGAATTGCCATTGAGGTTGCTCAAGGACTAGCTTACATTCACAAGGACTATGTCCCACATTTACTTCATCGAAACGTCAAATCGTCGAACATTCTATTAGACGCCGACTTTGTCCCAAAGCTCACGGATTTTGCTCTTAACCATATCGTCGGAGAGTCGGCATTTCACTCAACTGTGGCTTCGGAATCTGCTCATTCCTGCTATATTGCACCAGAGTATAAATACAACAAAAAAGCAACAGAGCAAATGGATGTGTACAGCTTTGGTGTAGTATTGCTAGAACTGGTGACTGGGAGACAAGCCGAGCGATCGGAATCAACGGACTCTCTCGACGTCGTCCAGTGGGTGAGAAGGAAGGTGAACATAGCCAATGGAGCTTCCCAAGTCCTTGACCCGAGCATCTCTGAGCACTCTCAAGGACAAATGCTGGAAGCTCTGGACATTGCCCTCCAATGCACTTCAATGATGCCTGAAAAACGACCGTCGATGCTCGAAGTTGCCAAGGCACTTCAACTGATCGGCTCGACAACAAACCTCCACGACGCAGCCTCCTCGGCTGCAGAGGACGGTTCGGCTCCGAGCTGA 2694 43.43 MASPFKPPLLLSLAFAFFVLGFSSSEESTLLTFKASIKDLTNSLSNWVSSSSSSSSSSSSSTHFCNWTGISCVSSSSPSLLSVSAIDLQGLNLSGEISSSICELPRLAHLNLADNQFNQPIPLHLSQCSSLETLNLSNNLIWGTIPDQISLFGSLRVLDFGKNHIEGKIPEGIAALKSLQILNLRSNLISGRVPSVVFHNLTDLLVVDLSENSYLLSDIPSEIGKLEKLEELWLQSSGFYGEIPSSLLGLRSLTVLDLSQNNLTGKLPEMLGSSLKNLVSFDVSENKLVGSFPNGFCSGKGLVSLSLHTNFFTGTLPNSLNQCLNLERFQVQNNGFSGDFPKTLWSLPMIKLIRAENNGFSGEVPESISMAAHLEQVQLDNNSFSSKIPRGLGSIRSLYRFSASLNQLYGELPPNFCDSPLMSIINLSHNSLSGQIPELKNCKKLVSLSLAGNSLTGEIPTSLADLPVLTYLDLSDNNLTGSIPRGLENLKLALFNVSFNQLSGAVPFSLISGLPASFLQGNPDLCGPGLQTPCSQGHQTNHMSGLNRMTCALISIACVLGVMSLAAGFFLYYRSFKPKSHVDNWHSVYFYPLRISEHELIMGMNEKTAQGCGGAFGQVFILSLPSRELIAVKKLVNFGSRSWKSLKAEVKTLAKIRHKNIIKILGFCHSDDAIFLIYEFLHKGSLADLICRNDSCLNWNVRLRIAIEVAQGLAYIHKDYVPHLLHRNVKSSNILLDADFVPKLTDFALNHIVGESAFHSTVASESAHSCYIAPEYKYNKKATEQMDVYSFGVVLLELVTGRQAERSESTDSLDVVQWVRRKVNIANGASQVLDPSISEHSQGQMLEALDIALQCTSMMPEKRPSMLEVAKALQLIGSTTNLHDAASSAAEDGSAPS 897
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 42460360 42463601 + Tan0006771.1 Tan03g0284 745788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0284 897 Pfam Protein tyrosine and serine/threonine kinase 614 872 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g0284 897 SUPERFAMILY L domain-like 215 526 - -
Tan03g0284 897 Gene3D Ribonuclease Inhibitor 276 537 IPR032675 -
Tan03g0284 897 Gene3D Ribonuclease Inhibitor 23 196 IPR032675 -
Tan03g0284 897 SMART LRR_typ_2 466 490 IPR003591 -
Tan03g0284 897 SMART LRR_typ_2 104 128 IPR003591 -
Tan03g0284 897 SMART LRR_typ_2 250 274 IPR003591 -
Tan03g0284 897 SMART LRR_typ_2 201 226 IPR003591 -
Tan03g0284 897 SMART LRR_typ_2 275 299 IPR003591 -
Tan03g0284 897 SMART LRR_typ_2 129 152 IPR003591 -
Tan03g0284 897 SMART LRR_typ_2 176 200 IPR003591 -
Tan03g0284 897 ProSiteProfiles Leucine-rich repeat profile. 468 491 IPR001611 GO:0005515(InterPro)
Tan03g0284 897 Gene3D Ribonuclease Inhibitor 197 275 IPR032675 -
Tan03g0284 897 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 273 537 - -
Tan03g0284 897 Pfam Leucine rich repeat N-terminal domain 24 72 IPR013210 -
Tan03g0284 897 PRINTS Leucine-rich repeat signature 253 266 - -
Tan03g0284 897 PRINTS Leucine-rich repeat signature 466 479 - -
Tan03g0284 897 Pfam Leucine rich repeat 444 502 IPR001611 GO:0005515(InterPro)
Tan03g0284 897 Pfam Leucine rich repeat 130 189 IPR001611 GO:0005515(InterPro)
Tan03g0284 897 SUPERFAMILY L domain-like 34 297 - -
Tan03g0284 897 ProSiteProfiles Protein kinase domain profile. 605 876 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0284 897 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 681 881 - -
Tan03g0284 897 FunFam Leucine-rich repeat family protein 25 194 - -
Tan03g0284 897 Pfam Leucine Rich Repeat 252 273 IPR001611 GO:0005515(InterPro)
Tan03g0284 897 Gene3D Transferase(Phosphotransferase) domain 1 682 892 - -
Tan03g0284 897 Gene3D Phosphorylase Kinase; domain 1 612 681 - -
Tan03g0284 897 ProSiteProfiles Leucine-rich repeat profile. 130 152 IPR001611 GO:0005515(InterPro)
Tan03g0284 897 PANTHER LEUCINE RICH REPEAT KINASE 2 217 874 IPR051420 -
Tan03g0284 897 SUPERFAMILY Protein kinase-like (PK-like) 614 879 IPR011009 -
Tan03g0284 897 FunFam - 599 680 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0284 Tan-Chr3:42460360 Tan03g2898 Tan-Chr3:82018236 2.90E-56 dispersed
Tan03g0284 Tan-Chr3:42460360 Tan02g2519 Tan-Chr2:93824280 8.40E-56 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67271 PF00069 Pkinase 2.70E-38 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0284 - - - 0.0