Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0324 ATGTCCTCCTTCCGCCCATTTGCTTCCTTCCTCACCTTCTTCTCATTTTTCATTTCCTTCTCTTCCTCTCTCAACTCCGATGGTCTCTCCCTTCTCGCCCTCAAGGCCGCCATTGAAACCGACCCATCTCACGTTCTCGAGTCCTGGTCCGAGTTCGACTCCACCCCATGTCATTGGCCTGGAATCGTCTGCACTCGCGACCGAGTCACTCAGCTCTCTCTCCCCAACAAAGGCCTCACCGGCTACATCCCTTCCGAACTTGGCCTCCTCGATTCCCTCCGCCGCCTCAGCCTCGCCTTCAACAATTTCTCTAAACCGATCCCTTCTCATCTCTACAACGCCACGAATCTCGTCGTTCTAGACCTTTCCCACAACTCCCTTTCTGGTCCGGTTTCGGATCAAATCGGTGACCTCAGGAAGCTTCGCCACCTCGACTTGTCCTCTAATTTCCTCAATGGGTCTCTCCCGAAGCGGCTGACGGAGTTAACCGAGCTCGTCGGGACTCTCAATTTGTCCTACAATCGTTTCTCCGGCGAGGTCCCGCCGTCTTTCGGGAACCTCCCGCTGATTGTGAATCTCGATGTCCGTCACAACAATCTCACCGGAAAGATTCCGCAGGTGGGTTCGCTGTTGAATCAAGGCCCGACGGCGTTCTCTGGCAACCCGAGCCTCTGTGGGTTTCCGTTACAGACGCCATGTCCGGAAGCTCAGAACCCGAACGTTTTTCCTGAGAATCCACAGAATCCCAAGTCGTTGAACGGTAATTTTCCGGGATACGGCGGCGGAAGAACGACAGGGAGCAGTGGCGCCGCGTCGGCGACGGTGGCGGTGGTCTCATCAATATTTGCGGTGGTGGGGGCGGTGTCGCTGACGCTGTGGTGGTTCCGGAGAAAGGCGGTGGTGGGGAGGCCTGTGGAGGGCAAAACGGGAAAGGGGAGTCCGGAGGGGGAGAGTGAGGCAGATTTGGAAGGGCAGGATGGTAAATTCGCGGTGATCGATGAAGGGATGAATTTGGAATTAGAGGATTTGTTGAGGGCATCAGCGTACGTGGTGGGGAAGAGCAGGAGTGGGATAGTATATAAGGTAGTGGCAGGGCGGGGATCGGGTGCGGCCGCGAGTATTGTAGCTGTTAGGAGACTTAACGATGGTGATGCCACGTTGACGTTTAAGGATTTTGAGTATGAGATGGAGTCCATCGGTAGGGTCCACCATCCCAACATCGTACGGTTGAGAGCTTATTACTATGCAAGTGATGAGAAATTGCTGGTCACTGATTTCATCAAGAATGGAAGCTTGCACTCTGCCCTACATGGAGGTCCCTCCAGTTCTTTGTCACCTCTGCCATGGTCTGCAAGGTTAAAAATTGCTCAAGGAGCTGCAAGGGGTTTGGCGTACATTCATGAATTTGGTGCTCGGAAGTATGTACATGGAAACGTAAAATCGACGAAAATCCTTCTCGACGATGATCTCGAGCCTCACGTTTCAGGTTTTGGACTCATTCGTCTCGGCCAAGGAACGCCCAAGTTCACTGCAACCTCATCCAAAAAGTTGAGCTCAAGCCAGAATATGATCACCTCAATCATGGGGCCAAGCATTACAACTCCCTCGGCAATGTACTTGGCACCCGAGGTTCGGGAGTTTGGAGGGAAGTACACTCAGAAATGTGACGTCTACTCGTTCGGTATCGTCCTCCTGGAACTTTTGAGTGGTCGATTGCCTGATGTAGGATCGGAAAATGATGGGAAGGGGCTGGAATGTTTTGTGAGAAAGGCATTTCAAGAAGAGCGTCCCTTGACTGAGATTATAGACCCGGCACTTGTGCCTGAGATTTATGCCAAGAAACAAGTGGTTTCAACGTTTCACATTGCACTGAATTGCACAGAGCTTGATCCCGAGCTTCGTCCAAGAATGAGAACGGTTTCGGAGAGTCTCGATCGTATCGAATCTCAGTGA 1953 52.48 MSSFRPFASFLTFFSFFISFSSSLNSDGLSLLALKAAIETDPSHVLESWSEFDSTPCHWPGIVCTRDRVTQLSLPNKGLTGYIPSELGLLDSLRRLSLAFNNFSKPIPSHLYNATNLVVLDLSHNSLSGPVSDQIGDLRKLRHLDLSSNFLNGSLPKRLTELTELVGTLNLSYNRFSGEVPPSFGNLPLIVNLDVRHNNLTGKIPQVGSLLNQGPTAFSGNPSLCGFPLQTPCPEAQNPNVFPENPQNPKSLNGNFPGYGGGRTTGSSGAASATVAVVSSIFAVVGAVSLTLWWFRRKAVVGRPVEGKTGKGSPEGESEADLEGQDGKFAVIDEGMNLELEDLLRASAYVVGKSRSGIVYKVVAGRGSGAAASIVAVRRLNDGDATLTFKDFEYEMESIGRVHHPNIVRLRAYYYASDEKLLVTDFIKNGSLHSALHGGPSSSLSPLPWSARLKIAQGAARGLAYIHEFGARKYVHGNVKSTKILLDDDLEPHVSGFGLIRLGQGTPKFTATSSKKLSSSQNMITSIMGPSITTPSAMYLAPEVREFGGKYTQKCDVYSFGIVLLELLSGRLPDVGSENDGKGLECFVRKAFQEERPLTEIIDPALVPEIYAKKQVVSTFHIALNCTELDPELRPRMRTVSESLDRIESQ 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 47240675 47246451 + Tan0000793.1 Tan03g0324 745828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0324 650 SUPERFAMILY L domain-like 25 230 - -
Tan03g0324 650 FunFam Leucine-rich repeat receptor-like protein kinase 140 235 - -
Tan03g0324 650 ProSiteProfiles Protein kinase domain profile. 345 650 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0324 650 PRINTS Leucine-rich repeat signature 117 130 - -
Tan03g0324 650 PRINTS Leucine-rich repeat signature 138 151 - -
Tan03g0324 650 Gene3D Phosphorylase Kinase; domain 1 329 426 - -
Tan03g0324 650 Pfam Leucine rich repeat 92 149 IPR001611 GO:0005515(InterPro)
Tan03g0324 650 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 26 648 IPR046959 -
Tan03g0324 650 Gene3D Ribonuclease Inhibitor 167 235 IPR032675 -
Tan03g0324 650 Gene3D Ribonuclease Inhibitor 24 166 IPR032675 -
Tan03g0324 650 Pfam Leucine rich repeat N-terminal domain 24 65 IPR013210 -
Tan03g0324 650 SUPERFAMILY Protein kinase-like (PK-like) 350 644 IPR011009 -
Tan03g0324 650 Gene3D Transferase(Phosphotransferase) domain 1 427 650 - -
Tan03g0324 650 MobiDBLite consensus disorder prediction 245 265 - -
Tan03g0324 650 FunFam Leucine-rich repeat receptor-like kinase 29 133 - -
Tan03g0324 650 Pfam Protein tyrosine and serine/threonine kinase 351 644 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g0324 650 Pfam Leucine Rich Repeat 168 187 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0324 Tan-Chr3:47240675 Tan04g0068 Tan-Chr4:543116 4.00E-100 dispersed
Tan03g0324 Tan-Chr3:47240675 Tan11g1832 Tan-Chr11:21409204 1.70E-74 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67272 PF07714 PK_Tyr_Ser-Thr 1.30E-25 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0324 - - - 0.0