Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0332 ATGGCGGATTTCCAAAGCTACATAATTCTCTTCCTCATATGGCTGTTTTCCACCATCACAATTCGCTTCATTTTCGTCAAAACCAAATCAAACCCTCGTCTTCCTCCAAGCCCTTTTGCTCTCCCCATCATTGGTCATCTCCACCTACTTGGGCCATTGCCCCACAAAGCTTTCCACAAGCTCTCAACCCGCCATGGCCCTCTAATGCACCTCCGTCTAGGCTCCGTCCATTGCGTCGTCGTTTCGTCCCCCGAAATAGCGAAACAAGTCCTCAAAACACACGAATCTTCCTTCTCCAACCGACCCCATTTGGCTGCAGTTGACTATCTAACCTACGGCTCAGCGGATTTCTCCTTCGCTCCCTATGGACCCTATTGGAAGTTCATGAAGAAGGTTTGCATGTCGGAGCTCCTCGGCGGCCGAACACTTGACAGCCTCGCCCCCGTGAGACAAGACGAGATGCGGCGGTTTCTACGGTCGCTGCAGACGAAGGCGGGCGAGGGGAAAGAAGTTGATGTTGGAGGAGAGCTGATGAGGCTGAGCAACAATGTGATATCTAGAATGACATTGGGAAAAAGATGTGCTGAGGATGAGGAAGAGGCTGAGGGAATAAGGAAATTGGTGAAGGATGTAGCTGTGCTTACAGGGACTTTTAATGTTTCGGATTATATTTGGTTTTGTAAGAATTTTGATTTGCAAAGGCTTGGGAAGAGGCTGAGGGTAGTTCGTGAGAGATTTGATCAGATGATGGAGAGGATGATAAAGGAGCATGAAGAGAATTTGAAGATGGAAATAGAGGGAAATGGTGATGACAAAGTGAAAGATTTGCTTGATATTTTGCTTCTTAAGTTTAGGGATGAAAACTCTGAGATGAAGTTGACTAGAGACAACATCAAGGCCTTTGTTCTGGACATATTTGCAGCAGGGACAGATGCATCAGCAATAACAACAGAATGGGGATTGGCAGAGCTAATGAACCACCCAAACATAATGGAGAAAGCAAGAGAAGAACTTCACACAGTTGTAGGAAAGAGCAGAGTTGTTGAAGAATCAGACATTGTCAATCTTCCCTATCTTCAAGCAATAGTAAAAGAGACATTAAGGCTTCACTCAAGCCCATTGATTGTGAGAGAGTCAACTGAAAGCTGCACAATAAATGGGTATGAGATTCCATCAAAGACCCAATTGTATGTGAATGTTTGGGCCATTGGGAGAGACCCAAATCACTGGGAAAACCCTCTTGAGTTTAAGCCAGAGAGGTTTATGGACAAAGAAAATGGTGATTTGAGAGGGCAGAATTTTCAGTTGTTGCCATTTGGGAGTGGGAGAAGAAGCTGTCCTGGAACAACACTTGCATTGCTGATGGTTCAGACTATTTTGGCTTCTATGGTTCAATGTTTTGATTGGAAGGTTGGTGGAGGAGATGGAAAAGTTGATATGGAAGAAGGGCCTGGCCTTACACTTCCTAGAGCACACCCTTTGGTTTGTGTTCCAATGCCTTGTCTTAGTCCATTTCCAACACTTTGA 1527 45.25 MADFQSYIILFLIWLFSTITIRFIFVKTKSNPRLPPSPFALPIIGHLHLLGPLPHKAFHKLSTRHGPLMHLRLGSVHCVVVSSPEIAKQVLKTHESSFSNRPHLAAVDYLTYGSADFSFAPYGPYWKFMKKVCMSELLGGRTLDSLAPVRQDEMRRFLRSLQTKAGEGKEVDVGGELMRLSNNVISRMTLGKRCAEDEEEAEGIRKLVKDVAVLTGTFNVSDYIWFCKNFDLQRLGKRLRVVRERFDQMMERMIKEHEENLKMEIEGNGDDKVKDLLDILLLKFRDENSEMKLTRDNIKAFVLDIFAAGTDASAITTEWGLAELMNHPNIMEKAREELHTVVGKSRVVEESDIVNLPYLQAIVKETLRLHSSPLIVRESTESCTINGYEIPSKTQLYVNVWAIGRDPNHWENPLEFKPERFMDKENGDLRGQNFQLLPFGSGRRSCPGTTLALLMVQTILASMVQCFDWKVGGGDGKVDMEEGPGLTLPRAHPLVCVPMPCLSPFPTL 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 47950415 47953397 - Tan0012192.1 Tan03g0332 745836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0332 508 Pfam Cytochrome P450 35 496 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan03g0332 508 SUPERFAMILY Cytochrome P450 29 499 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan03g0332 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Tan03g0332 508 PANTHER CYTOCHROME P450 93A3-LIKE 8 499 - -
Tan03g0332 508 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan03g0332 508 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan03g0332 508 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan03g0332 508 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan03g0332 508 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan03g0332 508 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan03g0332 508 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan03g0332 508 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan03g0332 508 CDD CYP93 66 498 - -
Tan03g0332 508 FunFam Cytochrome P450 family protein 26 496 - -
Tan03g0332 508 Gene3D Cytochrome P450 25 496 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan03g0332 508 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan03g0332 508 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan03g0332 508 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan03g0332 508 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0332 Tan-Chr3:47950415 Tan08g1464 Tan-Chr8:60149841 7.60E-171 dispersed
Tan01g1760 Tan-Chr1:18825459 Tan03g0332 Tan-Chr3:47950415 3.10E-92 transposed
Tan03g2216 Tan-Chr3:76624428 Tan03g0332 Tan-Chr3:47950415 8.50E-63 transposed
Tan04g2875 Tan-Chr4:88000742 Tan03g0332 Tan-Chr3:47950415 9.90E-110 transposed
Tan07g2153 Tan-Chr7:73174721 Tan03g0332 Tan-Chr3:47950415 2.80E-85 transposed
Tan09g2051 Tan-Chr9:71010056 Tan03g0332 Tan-Chr3:47950415 8.30E-96 transposed
Tan10g0113 Tan-Chr10:1330499 Tan03g0332 Tan-Chr3:47950415 2.10E-71 transposed
Tan03g0332 Tan-Chr3:47950415 Tan08g1279 Tan-Chr8:42694608 1.60E-72 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0332 K24188 - csv:101213143 845.114