Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0401 ATGGACACCAAGCCCACCGAGATCAGCAGCTCGAAGATGTTCGGAGGCTACAACCGAAGATACCGCCATTACAGTCCAACTCTTGGCTGCTCCATGACCTTCCACATCTACTTCCCTCCTTCTCCTCTTCCGTCCCACAAATTTCCGGTACTGTACTGGCTCTCTGGCCTTACTTGTACAGATGACAATTTTATAATTAAGTCAGGGGCTCAACGCACTGCTTCCAGTGAAGGTGTTGCTTTAATTGCACCTGATACATCTCCAAGAGGCCTGAATGTGGAAGGAGAAGCTGACAATTGGGATTTTGGTGTTGGTGCTGGATTTTATCTCAATGCTACACAAGAGAAATGGAAAAATTGGCGTATGTATGATTATGTTGTCAAGGAGCTACCTAAACTTCTCAGTGAGAACTTTCCACAGCTTGATACATCCCGGGCATCTATATCTGGTCACTCAATGGGTGGGCATGGGGCTCTAACCATCTACCTAAAAAACTTGGACAAATATAAGTCAGTATCTGCCTTTGCACCCATTGCCAATCCTATAAACTGTCCCTGGGGCCAGAAGGCATTCACAAATTATTTAGGTAGCAACAAAGCTGACTGGGAGGAATATGATGCTACTCATCTAATCTCAAAGTTTCACGATGTATCTGCTAGTGCTACCATTCTAATTGATCAGTTTTATTGTAAGGACTATTTGTAA 705 43.97 MDTKPTEISSSKMFGGYNRRYRHYSPTLGCSMTFHIYFPPSPLPSHKFPVLYWLSGLTCTDDNFIIKSGAQRTASSEGVALIAPDTSPRGLNVEGEADNWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSENFPQLDTSRASISGHSMGGHGALTIYLKNLDKYKSVSAFAPIANPINCPWGQKAFTNYLGSNKADWEEYDATHLISKFHDVSASATILIDQFYCKDYL 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 54302104 54305763 + Tan0006581.4 Tan03g0401 745905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0401 234 PANTHER S-FORMYLGLUTATHIONE HYDROLASE 3 227 IPR014186 GO:0005829(PANTHER)|GO:0018738(PANTHER)|GO:0018738(InterPro)|GO:0046294(InterPro)
Tan03g0401 234 NCBIfam S-formylglutathione hydrolase 8 234 IPR014186 GO:0018738(InterPro)|GO:0046294(InterPro)
Tan03g0401 234 Gene3D alpha/beta hydrolase 6 232 IPR029058 -
Tan03g0401 234 Pfam Putative esterase 25 227 IPR000801 -
Tan03g0401 234 SUPERFAMILY alpha/beta-Hydrolases 8 216 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0399 Tan-Chr3:54302104 Tan03g0401 Tan-Chr3:54302104 1.90E-140 dispersed
Tan03g0400 Tan-Chr3:54302104 Tan03g0401 Tan-Chr3:54302104 3.10E-135 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0401 K01070 - csv:101207741 440.654