Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g0519 | ATGCGATTGGATCTAATGCAGAATCAAGTACCTGTTAGTGTAGATGGGGCTGCTCCCATTCTTGATGGTGGTCTTGTGGCTGTTAAGAAACCAGGAGCTCCCAAGCCAGCACCGAAGAAAGTTGCAGCCAAGCCAAAAGCAGAGGTGATCGAGATAAGCCCGGATACTGTCGAACAAGATCGGGGCAAGGAAGCCAAATGTGCTAACAAGAAAAAGGAAGAAGAAGGGCCCTCAAAGAAGAAGGCTCAGACTACTCTCACTTCAGTCCTGACTGCTAGAAGCAAGGCTGCTTGTGGTATCACCAAGAAGCCCAAAGAACAGATTTTTGACATTGATGCTGCAGATGTTGGAAATGAGTTGGCAGCAGTGGAATATGTTGAGGACATTTACAAGTTCTATAAGGAAGTTGAGAATGAGAATAGGCCTCATGATTATATGGATTCACAACCTGAGATCAACATTTCAATGAGGGCGATTTTGGTGGATTGGCTGGTTGATGTCCACAGCAAGTTTGAACTTTCACCCGAAACATTCTACCTCACGATCAATATAATCGATCGATTCCTTGCGACAAAGGTGGTTCCAAGAAGGGAATTGCAGTTGGTGGGTATTGGGGCAATGCTCATAGCCTCCAAATACGAAGAGATTTGGGCACCAGAGGTAAATGACTTCGTGTGTCTTTCAGATAGAGCTTACACTAATGAACAAATACTAGTGATGGAGAAAAAGATACTTGGCAAGCTGGAATGGACCTTGACTGTGCCTACACTGTATGTATTCCTGGCTCGATTCATCAAGGCGTCGAAGGACTCCGATCACGAGATGGAAAGTCTGGTTTATTTTCTGGCTGAACTTGGCACAATGCATTACAACACCTCAATAATGTACTGCCCATCGATGATTGCCGCCTCGGCAGTCTACGCGGCTCGATGCACGCTGAAGAAAACCCCTGCTTGGGATGACACCCTCAAACTCCACACTGGTTTCTCAGAGCCTCAACTAATTGATTGTGCAAAACTTCTGGTGGGATTCCATGGGGTAGCAAGCAAGAACAAGCTCCAAGTAACATACCGAAAGTACTCGAGCTCCGCGCAGGGAGCGGTAGCTTTGCTTCAGCCAGCCAAAGCTCTGTTGGCTGCTGCCCATTGA | 1149 | 46.74 | MRLDLMQNQVPVSVDGAAPILDGGLVAVKKPGAPKPAPKKVAAKPKAEVIEISPDTVEQDRGKEAKCANKKKEEEGPSKKKAQTTLTSVLTARSKAACGITKKPKEQIFDIDAADVGNELAAVEYVEDIYKFYKEVENENRPHDYMDSQPEINISMRAILVDWLVDVHSKFELSPETFYLTINIIDRFLATKVVPRRELQLVGIGAMLIASKYEEIWAPEVNDFVCLSDRAYTNEQILVMEKKILGKLEWTLTVPTLYVFLARFIKASKDSDHEMESLVYFLAELGTMHYNTSIMYCPSMIAASAVYAARCTLKKTPAWDDTLKLHTGFSEPQLIDCAKLLVGFHGVASKNKLQVTYRKYSSSAQGAVALLQPAKALLAAAH | 382 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 59500438 | 59502123 | - | Tan0019586.1 | Tan03g0519 | 746023 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g0519 | 382 | MobiDBLite | consensus disorder prediction | 53 | 85 | - | - | |
Tan03g0519 | 382 | SUPERFAMILY | Cyclin-like | 117 | 252 | IPR036915 | - | |
Tan03g0519 | 382 | Pfam | Cyclin, N-terminal domain | 128 | 252 | IPR006671 | - | |
Tan03g0519 | 382 | Pfam | Cyclin, C-terminal domain | 255 | 373 | IPR004367 | - | |
Tan03g0519 | 382 | PIRSF | Cyclin_A_B_D_E | 6 | 382 | IPR046965 | GO:0016538(InterPro)|GO:0044772(InterPro) | |
Tan03g0519 | 382 | PANTHER | CYCLINS | 103 | 361 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Tan03g0519 | 382 | SMART | Cyclin_C_2 | 255 | 374 | IPR004367 | - | |
Tan03g0519 | 382 | FunFam | G2/mitotic-specific cyclin-1 | 243 | 369 | - | - | |
Tan03g0519 | 382 | Gene3D | - | 128 | 369 | - | - | |
Tan03g0519 | 382 | SUPERFAMILY | Cyclin-like | 254 | 375 | IPR036915 | - | |
Tan03g0519 | 382 | ProSitePatterns | Cyclins signature. | 157 | 188 | IPR048258 | - | |
Tan03g0519 | 382 | CDD | CYCLIN_AtCycB-like_rpt1 | 105 | 250 | - | - | |
Tan03g0519 | 382 | SMART | cyclin_7 | 162 | 246 | IPR013763 | - | |
Tan03g0519 | 382 | SMART | cyclin_7 | 259 | 343 | IPR013763 | - | |
Tan03g0519 | 382 | MobiDBLite | consensus disorder prediction | 53 | 80 | - | - | |
Tan03g0519 | 382 | Gene3D | - | 142 | 253 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g0519 | Tan-Chr3:59500438 | Tan03g0521 | Tan-Chr3:59516029 | 6.90E-201 | dispersed | |
Tan03g0519 | Tan-Chr3:59500438 | Tan03g0520 | Tan-Chr3:59500438 | 2.10E-210 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g0519 | K21777 | - | csv:101217210 | 588.571 |