Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0521 ATGGCTTCAAGACCAGTAGTTCCCCAACAAATCAGAGGTGAGGCGGCGATCGGCGGAGGAAAGCAGGTGAAGGGTGGGGCGGCAGTGGATGCAGCAAGGAACCGCCGAGCGTTGGGCGATATTGGGAATTTGGTAACTGTTCGAGGAATTGACGCAAAGGCAAATCGACCTATTACAAGGAGTTTCTGTGCTCAGTTGCTTGCCAATGCCCAAGCTGCTGCAAAAGCTGAAAATAATAAGAAACAAGTGCCTGTTAATGTAGATGGGGCTGCTCCCATTCTTGATGTTGGTATTGTGGCTGTTAAGAAACCAGGAGCTCCCAAGCCAGCACCAAAGAAAGTCGCTGCCAAGCCAAAAGTAGAGGTGATCGTGATAAGCCCGGATACGGTTGAACAAGATCGGGGCAAGGAAGCCAAATGTGCTAACAAGAAAAGGGAAGGAGAAGGGGGGGCCTCAAAGAAGAAGGCTCACACTACTCTCACTTCAGTACTGACTGCTAGAAGCAAGGCTGCTTGTGGTGTAACCAAGAAGCCCAAAGAACAGATTTTTGACATTGATGCTGCAGATGTTGGAAATGAGTTGGCAGCAGTGGAATATGTTGAGGACATTTACAAGTTCTATAAGGAAGTTGAGAATGAGAATAGGCCTCATGATTATATGGATTCACAACCTGAGATAAACATTTCAATGAGGGCGATTTTGGTGGATTGGCTGGTTGATGTCCACAGCAAGTTTGAACTTTCGCCCGAAACATTCTACCTCACGATCAATATAATCGATCGATTCCTTGCGACAAAGGTGGTTCCAAGAAGGGAATTGCAGTTGGTGGGTATTGGGGCAATGCTCATAGCCTCCAAATACGAAGAGATTTGGGCACCAGAGGTAAATGACTTCGTGTGCCTTTCAGATAGAGCTTACACTAATGAACAGATACTAGTGATGGAGAAAAAGATACTTGGCAAGCTGGAATGGACCTTGACTGTGCCTACACTGTATGTATTCCTAGCTCGATTCATCAAGGCGTCGAAGGACTCCGATCACGAGATGGAAAGTCTGGTTTATTTTCTGGCTGAACTTGGCACAATGCATTACAACACCTCAATAATGTACTGCCCATCGATGATTGCCGCCTCGGCAGTCTACGCGGCTCGATGCACGCTGAAGAAAACCCCTGCTTGGGATGACACCCTCAAACTCCACACTGGTTTCTCAGAGCCTCAACTAATTGATTGTGCAAAACTTCTGGTGGGATTCCATGGGGTAGCAAGCAAGAACAAGCTTCAAGTAATATACCGAAAGTACTCGAGCTCTGAGCGGGGAGCGGTAGCGTTGCTTCAGCCAGCCAAAGCTCTGTTGGCTGCTGCCCATTGA 1371 47.56 MASRPVVPQQIRGEAAIGGGKQVKGGAAVDAARNRRALGDIGNLVTVRGIDAKANRPITRSFCAQLLANAQAAAKAENNKKQVPVNVDGAAPILDVGIVAVKKPGAPKPAPKKVAAKPKVEVIVISPDTVEQDRGKEAKCANKKREGEGGASKKKAHTTLTSVLTARSKAACGVTKKPKEQIFDIDAADVGNELAAVEYVEDIYKFYKEVENENRPHDYMDSQPEINISMRAILVDWLVDVHSKFELSPETFYLTINIIDRFLATKVVPRRELQLVGIGAMLIASKYEEIWAPEVNDFVCLSDRAYTNEQILVMEKKILGKLEWTLTVPTLYVFLARFIKASKDSDHEMESLVYFLAELGTMHYNTSIMYCPSMIAASAVYAARCTLKKTPAWDDTLKLHTGFSEPQLIDCAKLLVGFHGVASKNKLQVIYRKYSSSERGAVALLQPAKALLAAAH 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 59516029 59518386 + Tan0010518.1 Tan03g0521 746025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0521 456 ProSitePatterns Cyclins signature. 231 262 IPR048258 -
Tan03g0521 456 Gene3D - 202 443 - -
Tan03g0521 456 Pfam Cyclin, N-terminal domain 202 326 IPR006671 -
Tan03g0521 456 Gene3D - 216 327 - -
Tan03g0521 456 CDD CYCLIN_AtCycB-like_rpt1 179 324 - -
Tan03g0521 456 FunFam G2/mitotic-specific cyclin-1 317 443 - -
Tan03g0521 456 PIRSF Cyclin_A_B_D_E 1 456 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
Tan03g0521 456 SUPERFAMILY Cyclin-like 328 449 IPR036915 -
Tan03g0521 456 SMART Cyclin_C_2 329 448 IPR004367 -
Tan03g0521 456 MobiDBLite consensus disorder prediction 133 156 - -
Tan03g0521 456 SMART cyclin_7 333 417 IPR013763 -
Tan03g0521 456 SMART cyclin_7 236 320 IPR013763 -
Tan03g0521 456 MobiDBLite consensus disorder prediction 133 153 - -
Tan03g0521 456 Pfam Cyclin, C-terminal domain 329 447 IPR004367 -
Tan03g0521 456 SUPERFAMILY Cyclin-like 191 326 IPR036915 -
Tan03g0521 456 PANTHER CYCLINS 177 435 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0519 Tan-Chr3:59500438 Tan03g0521 Tan-Chr3:59516029 6.90E-201 dispersed
Tan03g0521 Tan-Chr3:59516029 Tan05g0055 Tan-Chr5:582263 3.30E-109 dispersed
Tan03g0520 Tan-Chr3:59500438 Tan03g0521 Tan-Chr3:59516029 4.30E-242 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0521 K21777 - csv:101217210 701.049