Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0522 ATGGAAGGAAAGGGAAATTATGGAATTGCTAATTTTGTTGAGGGAGCTCAGCCTTACATTGCCATGATCTCTCTCCAATTTGGCTATGCTGGGATGAACATCATCACCAAGGTGGCTCTCAATCGCGGGATGAGTCACTACGTCCTCGTCACCTATCGCCAAGCCTTTGCCACCATCGCCCTCGCTCCGTTCGCCTTCTTCCTCGAAAGGAAAATGAGACCCAAGATTACTTTCCCTCTGTTCATGCAGATTTTCCTTCTGGGTTTGTTAGGACCAGTGATTGATCAGAACTTTTATTATGCTGGGTTGAAGCTCACTTCTCCTACCTTCTCATGTGCCATGAGTAATATGCTTCCTGCAATGACATTCATTTTGGCTCTTCTTTGCAGGATGGAGAAGTTGGAGATGAAGAAAGTGAGATGCCAAGCCAAGGTGGTGGGAACAATGGTGACAGTGGGTGGAGCCATTTTGATGACTTTATACAAAGGGAATGTCATAAGCTTCTTCTTTTGGTCTCACCATAACTATCTTCACTCTTCTTCTCATCCCAATTACTCCTTTGAAAGCACTGATCAAGATTGGGTCAAGGGCTCCATTCTCCTCCTTTTTGCTAATCTTGCTTGGGCTTTGTTCTTCATCCTTCAGGCCATGACATTGAGGAAGTACACAGCTCATCTTTCACTAACAACTCTTGTGTGCTTCTTGGGGACTTTGCAATCCATGGCTGTCACTTTTGTAATGGAAAACAAAGCATCTGTTTGGAACATTGGATGGGACATGAATCTTCTTGCTTCTTTTTATGCTGGAATAGTTTCATCAAGCATAGCTTATTATGTCCAAGGGATGATTATGCAGAAGAGAGGGCCTGTGTTTGTCACAGCCTTTACCCCTATGATCATGATCATTGTTGCCATTATGGGCTCTTTCATGCTTGTTGAGAAGATCTATATTGGACGTGTTCTTGGAGGTGTTCTAATGGTGGTGGGGCTATACTCAGTGCTATGGGGGAAATACAGAGATTACAAAGAAAAGGAAGCAATAGATCAAGAGGCCACCATTGTTGAACCAGTGAAGCTTTTCCATGTAAAAAAAGTTGAGAAAAAGAAGAAGAAATTAGCAACTGTAGTTGAAGATGAAGAAGAAGAAAGAGAAACGACAACAACATCATCAAACGACATCGAAATGCAAAGGAACGACACAACATCAAATGTCGGCAATAATGTTACAAAATTGCCATGCCCTCCACCATCACCCATTATTGTTGTTATTGCTATGGATCATGAAGCACCACCAAAAGTTTGA 1302 42.47 MEGKGNYGIANFVEGAQPYIAMISLQFGYAGMNIITKVALNRGMSHYVLVTYRQAFATIALAPFAFFLERKMRPKITFPLFMQIFLLGLLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFILALLCRMEKLEMKKVRCQAKVVGTMVTVGGAILMTLYKGNVISFFFWSHHNYLHSSSHPNYSFESTDQDWVKGSILLLFANLAWALFFILQAMTLRKYTAHLSLTTLVCFLGTLQSMAVTFVMENKASVWNIGWDMNLLASFYAGIVSSSIAYYVQGMIMQKRGPVFVTAFTPMIMIIVAIMGSFMLVEKIYIGRVLGGVLMVVGLYSVLWGKYRDYKEKEAIDQEATIVEPVKLFHVKKVEKKKKKLATVVEDEEEERETTTTSSNDIEMQRNDTTSNVGNNVTKLPCPPPSPIIVVIAMDHEAPPKV 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 59590944 59595188 + Tan0017902.1 Tan03g0522 746026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0522 433 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 161 - -
Tan03g0522 433 PANTHER WAT1-RELATED PROTEIN 20 361 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan03g0522 433 MobiDBLite consensus disorder prediction 389 410 - -
Tan03g0522 433 MobiDBLite consensus disorder prediction 378 410 - -
Tan03g0522 433 Coils Coil 362 382 - -
Tan03g0522 433 Pfam EamA-like transporter family 20 158 IPR000620 GO:0016020(InterPro)
Tan03g0522 433 Pfam EamA-like transporter family 196 334 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0522 Tan-Chr3:59590944 Tan04g0490 Tan-Chr4:4034185 3.30E-122 dispersed
Tan03g0522 Tan-Chr3:59590944 Tan08g1287 Tan-Chr8:43761805 3.10E-125 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0522 - - - 0.0