Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0550 ATGGACTTCTTACAGTCTTTGGAACCTCAAATCCTTCTGGGTTTGGCTGTGGCTGTTCTAGCCATTGCAGTTGGTGCTCTCTATTTATTATCCTCCTCCAAAAAAAGCAAATCCAGAGGTTGCTTGAATCCAGAGATTTTCAAGGAGTTTAAACTCATCAAGCGTGTGCAGCTGAGCCATAATGTGGCGAAGTTTACATTTACACTCCCAAGTCCTACTTCAGTTTTGGGTCTTCCCATTGGTCAACATATAAGTTGCAGGGGCAAGGATGGCCAAGGTGAAGAGGTTCTCAAACCTTACACGCCTATTACTTTGGATTCTGATGTTGGATATTTTGAATTGGTCATAAAGATGTATCCCCAAGGAAGGATGTCACACCATTTCCGACAGATGCGTGTTGGTGATTTTCTTTCTGTAAAAGGGCCTAAGGGGCGTTTCAGGTATCAACCAGGCCAGGTCAGAGCATTTGGGATGCTCGCCGGAGGCTCTGGCATTACTCCTATGTATCAAGTTGCTCGAGCCATATTAGAAAATCCAAATGACAAGACGAAGGTACATCTCATTTATGCCAATGTCACCTACGAGGACATTCTTTTAAAGGTAATCTCGCCATTTCTTCTTCAATGA 627 43.54 MDFLQSLEPQILLGLAVAVLAIAVGALYLLSSSKKSKSRGCLNPEIFKEFKLIKRVQLSHNVAKFTFTLPSPTSVLGLPIGQHISCRGKDGQGEEVLKPYTPITLDSDVGYFELVIKMYPQGRMSHHFRQMRVGDFLSVKGPKGRFRYQPGQVRAFGMLAGGSGITPMYQVARAILENPNDKTKVHLIYANVTYEDILLKVISPFLLQ 208
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 60028915 60034402 - Tan0018695.2 Tan03g0550 746054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0550 208 FunFam NADH-cytochrome b5 reductase 40 139 - -
Tan03g0550 208 Gene3D Translation factors 40 139 - -
Tan03g0550 208 CDD cyt_b5_reduct_like 50 200 - -
Tan03g0550 208 PANTHER NADH-CYTOCHROME B5 REDUCTASE 19 200 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
Tan03g0550 208 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 45 149 IPR017927 GO:0016491(InterPro)
Tan03g0550 208 PRINTS Cytochrome B5 reductase signature 157 176 - -
Tan03g0550 208 PRINTS Cytochrome B5 reductase signature 134 148 - -
Tan03g0550 208 PRINTS Cytochrome B5 reductase signature 98 105 - -
Tan03g0550 208 PRINTS Cytochrome B5 reductase signature 76 87 - -
Tan03g0550 208 Gene3D - 140 202 IPR039261 -
Tan03g0550 208 Pfam Oxidoreductase NAD-binding domain 158 200 IPR001433 GO:0016491(InterPro)
Tan03g0550 208 Pfam Oxidoreductase FAD-binding domain 50 148 IPR008333 -
Tan03g0550 208 SUPERFAMILY Riboflavin synthase domain-like 42 150 IPR017938 -
Tan03g0550 208 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 137 199 IPR039261 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0550 Tan-Chr3:60028915 Tan08g1334 Tan-Chr8:51426404 1.70E-89 dispersed
Tan03g0549 Tan-Chr3:60028915 Tan03g0550 Tan-Chr3:60028915 1.90E-110 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0550 K00326 - csv:101212569 366.696