Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0595 ATGGCGACCAATTTCTGGTCGTTGGCCTGTATTCGGAGTCAGAACAGCAGCAATCTGACTCCGCGCCCTCATTATCCGTCTATGCCCAAGTATCCAGCTGGGGTTTCGCTGCCGGAGAATGTCTTGCCGGCGACCGAATCGACGGCCTTCTTCTCCGTCACCGGAATGACCTGCTCTGCTTGTGCCGGCTCCGTCGAGAAGGCGATCAAACGGCTTCCTGGGATTCGTGAAGCCGTCGTTGACGTTTTGAATGCCAAAGCTAGGGTCCAGTTTTACCCTAGCTTCGTTAATGTGGATCAAATATGTGAGGCAATTAATGATGCAGGCTTTGAATCAAGTATGCTCAATGACGATATGATTGAAAGATGTCGAATTCGTGTAATTGGAATGACTTGCACTTCTTGTTCCACAACTTTGGAATCTACATTACAAGCAATTCATGGAGTTCAAAATGCCCAAGTTGCATTAGCCACAGAAGAGGCAGAAGTTTTTTACGATCCAAGAATTTTGAACTACAATCAGCTTCTTGAAGCCATTGAAGATTCTGGGTTTGAAGCTTTACTTATTAGCACAGAAGAAGATGTGAGCAAGATACAGCTCCAAGTTGATGGAGTGAGATCTGAGAATTCAATGAGAGTGATTGGGAGCTCTCTGGAAGCACTTCCTGGAGTTCTAGGTATTGATATTGATCCTGCACTCAGCAAACTTTCCTTGTCTTACAAGCCAAATGTCACAGGACCTCGGAATATTATCCAAGTGATTGAATCAACTGGATCTGGTCGATTTAAGGCGACAATATTTCCTGAAGGACAGGGAAGAGAAGCATATAAAAAGGAGGAAATTAACCAGTATTACAGATCATTTTTATGGAGTCTGATTTTTACAATACCAGTATTTTTAAGCTCTATGGTCTTCACTTATATCCCTGGTATTAAGGATGGGCTAGATGCCAAAATTGTCAATATGATGACTGTTGGGGAGCTGCTGAGGTGGGTGTTATCAACTCCTGTACAGTTCATTATTGGAAGGCGATTCTATACTGGGTCTTACAAAGCATTGCGCCATGGTTCTGCAAATATGGATGTTTTGATTGCTTTGGGAACTAATGCAGCATACTTTTATTCAGTCTACATGGTGTTAAGATCTGCAACCTCAAGTGATTTTAAGGCCACAGATTTCTTTGAGACCAGTTCCATGCTTATTTCATTCATTCTCCTTGGGAAATATCTTGAAGTCTTAGCTAAGGGAAAGACATCAGAGGCTATCGCCAAGCTTATGAAGTTGGTGCCTGAAACAGCAACCTTGCTTACTTTTGATAATGATGGAAATGTCATTAGGGAAGAAGAAATTGATAGTAGATTGATACAAAAGAATGATGTGATTAAAGTCATTCCAGGGGCAAAGGTTGCTTCTGATGGAGTTGTTGTTTGGGGACAAAGTCATGTTAATGAAAGCATGATTACTGGGGAAGCCAAGCCAGTGGCAAAGAGAACGGATGATACGGTGATTGGAGGGACCTTGAATGAGAATGGAGTGCTACATGTGAGGGCAACACACGTTGGATCTGAAAGTGCTCTTTCACAGATTGTGCGACTTGTTGAATCAGCTCAGATGGCCAAGGCTCCAGTTCAGAAAATTGCAGATCGCATCTCTAAGTTTTTTGTGCCAATGGTTATAGTCCTTTCATTGACAACATGGCTTGTCTGGTTTCTTACTGGGAAGTATGGTGGCTATCCAAAGTCCTGGATTCCTTCTTCCATGGATAGCTTTGAGCTTGCTCTCCAGTTTGGTATTTCAGTTATGGTCATAGCATGCCCTTGTGCTTTGGGCCTGGCAACTCCAACTGCTGTCATGGTTGGAACAGGAGTCGGTGCGTCAAAAGGTGTCTTAATCAAAGGGGGCCAAGCATTAGAGAGCGCTCACAAGGTGGATTGCATTGTGTTCGACAAAACTGGAACTCTTACGGTCGGGAAGCCAGTTGTGGTGAACACAAAGCTACTAAAAAATATGGCTCTGAAAGAATTCTATGAACTAGTTGCCGCAACTGAGGTAAACAGCGAGCATCCATTGGCCAAAGCCGTTGTTGAATATGCTAAAAAGTTCAAAGAAGAGGATGATAACCAAACTTGGCCTGAAGCACTAGATTTTATCTCCATTACTGGACATGGAGTTAAGGCCATCGTCCAAAACAAAGAAGTAATTGCAGGCAACAAGAGTCTTATGTTAGATCAGAACATCTTCATACCTGTTGAAGCTGAAGAAATATTAAAAGAAATAGAAGATTTGGCTCAAACTGGAATTTTGGTGTCCATTGATAGGAAATTGACCGGGGTTCTTGCCATATCTGATCCACTAAAACCAAGTGCTCGCGATGTCATTTCCGTACTCAAGGCTATGAAAGTTAAATCCATGATGGTGACAGGTGATAATTGGGGGACAGCGAAGTCCATAGCCAATGAGGTTGGGATTGATGACGTGATTGCAGAAGCTAAACCCGACCAGAAAGCAGAGGAAGTGAAGAGATTACAGTCTTTGGGTCATACCGTGGCAATGGTAGGAGACGGGATCAACGACTCCCCAGCGCTTGTGGCTGCAGATGTTGGAATGGCAATTGGTGCAGGCACAGACATTGCCATTGAGGCTGCTGACATAGTTCTCATGAAAAGCAACTTGGAGGATGTCATAACAGCCATCGACCTTTCGAGGAAAACGTTTTCCAGAATCCGTTTGAACTACATTTGGGCACTCGGTTACAATCTCCTCGGCATCCCTATTGCAGCAGGAGTCTTATTCCCATCAACTCGATTTCGGTTACCGCCATGGATTGCAGGAGCAGCAATGGCAGCTTCTTCTGTTAGTGTTGTTTGCAGTTCTCTCTTGCTCAAGTATTACAAAAGACCCAAGAAGCTTGATACCCTTGAGATACAAGGCATTAGAGTTGAGTAA 2946 43.62 MATNFWSLACIRSQNSSNLTPRPHYPSMPKYPAGVSLPENVLPATESTAFFSVTGMTCSACAGSVEKAIKRLPGIREAVVDVLNAKARVQFYPSFVNVDQICEAINDAGFESSMLNDDMIERCRIRVIGMTCTSCSTTLESTLQAIHGVQNAQVALATEEAEVFYDPRILNYNQLLEAIEDSGFEALLISTEEDVSKIQLQVDGVRSENSMRVIGSSLEALPGVLGIDIDPALSKLSLSYKPNVTGPRNIIQVIESTGSGRFKATIFPEGQGREAYKKEEINQYYRSFLWSLIFTIPVFLSSMVFTYIPGIKDGLDAKIVNMMTVGELLRWVLSTPVQFIIGRRFYTGSYKALRHGSANMDVLIALGTNAAYFYSVYMVLRSATSSDFKATDFFETSSMLISFILLGKYLEVLAKGKTSEAIAKLMKLVPETATLLTFDNDGNVIREEEIDSRLIQKNDVIKVIPGAKVASDGVVVWGQSHVNESMITGEAKPVAKRTDDTVIGGTLNENGVLHVRATHVGSESALSQIVRLVESAQMAKAPVQKIADRISKFFVPMVIVLSLTTWLVWFLTGKYGGYPKSWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASKGVLIKGGQALESAHKVDCIVFDKTGTLTVGKPVVVNTKLLKNMALKEFYELVAATEVNSEHPLAKAVVEYAKKFKEEDDNQTWPEALDFISITGHGVKAIVQNKEVIAGNKSLMLDQNIFIPVEAEEILKEIEDLAQTGILVSIDRKLTGVLAISDPLKPSARDVISVLKAMKVKSMMVTGDNWGTAKSIANEVGIDDVIAEAKPDQKAEEVKRLQSLGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGVLFPSTRFRLPPWIAGAAMAASSVSVVCSSLLLKYYKRPKKLDTLEIQGIRVE 981
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 60844816 60854956 - Tan0020027.1 Tan03g0595 746099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0595 981 PRINTS Copper-transporting ATPase 1 signature 48 73 - -
Tan03g0595 981 PRINTS Copper-transporting ATPase 1 signature 103 123 - -
Tan03g0595 981 PRINTS Copper-transporting ATPase 1 signature 74 97 - -
Tan03g0595 981 PRINTS Copper-transporting ATPase 1 signature 145 166 - -
Tan03g0595 981 SUPERFAMILY HMA, heavy metal-associated domain 122 192 IPR036163 GO:0046872(InterPro)
Tan03g0595 981 SFLD p-type atpase 629 904 IPR044492 -
Tan03g0595 981 Gene3D - 120 193 - -
Tan03g0595 981 Gene3D - 654 732 IPR023299 GO:0000166(InterPro)
Tan03g0595 981 Gene3D - 733 783 IPR023299 GO:0000166(InterPro)
Tan03g0595 981 ProSitePatterns Heavy-metal-associated domain. 127 156 IPR017969 GO:0046872(InterPro)
Tan03g0595 981 CDD P-type_ATPase_Cu-like 286 948 - -
Tan03g0595 981 FunFam Copper-transporting ATPase 1, putative 415 537 - -
Tan03g0595 981 Gene3D - 196 258 - -
Tan03g0595 981 CDD HMA 51 113 IPR006121 GO:0046872(InterPro)
Tan03g0595 981 ProSiteProfiles Heavy-metal-associated domain profile. 121 187 IPR006121 GO:0046872(InterPro)
Tan03g0595 981 Pfam Heavy-metal-associated domain 200 258 IPR006121 GO:0046872(InterPro)
Tan03g0595 981 Pfam Heavy-metal-associated domain 125 185 IPR006121 GO:0046872(InterPro)
Tan03g0595 981 Pfam Heavy-metal-associated domain 51 111 IPR006121 GO:0046872(InterPro)
Tan03g0595 981 SUPERFAMILY HAD-like 646 958 IPR036412 -
Tan03g0595 981 NCBIfam heavy metal translocating P-type ATPase 360 961 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Tan03g0595 981 SUPERFAMILY Calcium ATPase, transmembrane domain M 392 920 IPR023298 -
Tan03g0595 981 FunFam ATPase copper transporting beta 119 193 - -
Tan03g0595 981 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 980 - -
Tan03g0595 981 ProSitePatterns E1-E2 ATPases phosphorylation site. 649 655 IPR018303 -
Tan03g0595 981 Pfam E1-E2 ATPase 428 625 - -
Tan03g0595 981 PRINTS P-type cation-transporting ATPase superfamily signature 799 809 - -
Tan03g0595 981 PRINTS P-type cation-transporting ATPase superfamily signature 875 887 - -
Tan03g0595 981 PRINTS P-type cation-transporting ATPase superfamily signature 777 788 - -
Tan03g0595 981 PRINTS P-type cation-transporting ATPase superfamily signature 852 871 - -
Tan03g0595 981 PRINTS P-type cation-transporting ATPase superfamily signature 483 497 - -
Tan03g0595 981 PRINTS P-type cation-transporting ATPase superfamily signature 647 661 - -
Tan03g0595 981 CDD HMA 199 265 IPR006121 GO:0046872(InterPro)
Tan03g0595 981 FunFam Probable copper-transporting ATPase HMA5 755 909 - -
Tan03g0595 981 Gene3D - 614 909 IPR023214 -
Tan03g0595 981 Pfam haloacid dehalogenase-like hydrolase 643 866 - -
Tan03g0595 981 Gene3D - 415 537 - -
Tan03g0595 981 ProSiteProfiles Heavy-metal-associated domain profile. 47 113 IPR006121 GO:0046872(InterPro)
Tan03g0595 981 SFLD Haloacid Dehalogenase 629 904 - -
Tan03g0595 981 SUPERFAMILY HMA, heavy metal-associated domain 45 116 IPR036163 GO:0046872(InterPro)
Tan03g0595 981 FunFam Copper-transporting ATPase HMA5 46 117 - -
Tan03g0595 981 Gene3D - 44 114 - -
Tan03g0595 981 SUPERFAMILY Calcium ATPase, transduction domain A 447 533 IPR008250 -
Tan03g0595 981 ProSitePatterns Heavy-metal-associated domain. 53 82 IPR017969 GO:0046872(InterPro)
Tan03g0595 981 ProSiteProfiles Heavy-metal-associated domain profile. 196 262 IPR006121 GO:0046872(InterPro)
Tan03g0595 981 CDD HMA 125 186 IPR006121 GO:0046872(InterPro)
Tan03g0595 981 NCBIfam HAD-IC family P-type ATPase 400 934 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan03g0595 981 NCBIfam copper ion binding protein 51 111 IPR006122 GO:0005507(InterPro)
Tan03g0595 981 SUPERFAMILY HMA, heavy metal-associated domain 193 259 IPR036163 GO:0046872(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0595 Tan-Chr3:60844816 Tan07g1662 Tan-Chr7:67982549 0.00E+00 dispersed
Tan03g0595 Tan-Chr3:60844816 Tan08g0866 Tan-Chr8:10975454 2.50E-61 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0595 K17686 - csv:101218801 1773.83